Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CCM2LQ9NUG4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
CCM2LQ9NUG4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.39■□□□□ 0.37
CCM2LQ9NUG4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
CCM2LQ9NUG4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CCM2LQ9NUG4 AP003071.4-201ENST00000562276 1284 ntBASIC17.39■□□□□ 0.37
CCM2LQ9NUG4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.39■□□□□ 0.37
CCM2LQ9NUG4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CCM2LQ9NUG4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCM2LQ9NUG4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCM2LQ9NUG4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCM2LQ9NUG4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CCM2LQ9NUG4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.39■□□□□ 0.37
CCM2LQ9NUG4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCM2LQ9NUG4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCM2LQ9NUG4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCM2LQ9NUG4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCM2LQ9NUG4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCM2LQ9NUG4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCM2LQ9NUG4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCM2LQ9NUG4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCM2LQ9NUG4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCM2LQ9NUG4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCM2LQ9NUG4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.38■□□□□ 0.37
CCM2LQ9NUG4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCM2LQ9NUG4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCM2LQ9NUG4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.38■□□□□ 0.37
CCM2LQ9NUG4 MYLKP1-201ENST00000509077 1580 ntBASIC17.38■□□□□ 0.37
CCM2LQ9NUG4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.38■□□□□ 0.37
CCM2LQ9NUG4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.38■□□□□ 0.37
CCM2LQ9NUG4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCM2LQ9NUG4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCM2LQ9NUG4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCM2LQ9NUG4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CCM2LQ9NUG4 AL355355.2-201ENST00000442321 338 ntBASIC17.38■□□□□ 0.37
CCM2LQ9NUG4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CCM2LQ9NUG4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCM2LQ9NUG4 AC092865.7-201ENST00000641832 219 ntBASIC17.38■□□□□ 0.37
CCM2LQ9NUG4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCM2LQ9NUG4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.38■□□□□ 0.37
CCM2LQ9NUG4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.38■□□□□ 0.37
CCM2LQ9NUG4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.38■□□□□ 0.37
CCM2LQ9NUG4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CCM2LQ9NUG4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCM2LQ9NUG4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCM2LQ9NUG4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.38■□□□□ 0.37
CCM2LQ9NUG4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CCM2LQ9NUG4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCM2LQ9NUG4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCM2LQ9NUG4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCM2LQ9NUG4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCM2LQ9NUG4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.37■□□□□ 0.37
CCM2LQ9NUG4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CCM2LQ9NUG4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
CCM2LQ9NUG4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCM2LQ9NUG4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCM2LQ9NUG4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.37■□□□□ 0.37
CCM2LQ9NUG4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCM2LQ9NUG4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CCM2LQ9NUG4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCM2LQ9NUG4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCM2LQ9NUG4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCM2LQ9NUG4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.37■□□□□ 0.37
CCM2LQ9NUG4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.37■□□□□ 0.37
CCM2LQ9NUG4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.37■□□□□ 0.37
CCM2LQ9NUG4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCM2LQ9NUG4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.37■□□□□ 0.37
CCM2LQ9NUG4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCM2LQ9NUG4 KRT8P3-201ENST00000519669 1449 ntBASIC17.37■□□□□ 0.37
CCM2LQ9NUG4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCM2LQ9NUG4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCM2LQ9NUG4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.37■□□□□ 0.37
CCM2LQ9NUG4 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCM2LQ9NUG4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCM2LQ9NUG4 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 AC006116.8-202ENST00000587620 1550 ntBASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 AL096828.2-201ENST00000567259 1965 ntBASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms