Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 FLJ13224-201ENST00000313737 1514 ntBASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 AC087499.1-201ENST00000418141 1075 ntBASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 SLC25A6P5-201ENST00000435663 894 ntBASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 AC145285.6-201ENST00000604632 637 ntBASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC40Q9H9A6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC40Q9H9A6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC40Q9H9A6 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
LRRC40Q9H9A6 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRC40Q9H9A6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC40Q9H9A6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC40Q9H9A6 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC40Q9H9A6 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRC40Q9H9A6 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.53■□□□□ 0.56
LRRC40Q9H9A6 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRC40Q9H9A6 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC40Q9H9A6 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.53■□□□□ 0.56
LRRC40Q9H9A6 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRC40Q9H9A6 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.53■□□□□ 0.56
LRRC40Q9H9A6 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRC40Q9H9A6 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.53■□□□□ 0.56
LRRC40Q9H9A6 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.53■□□□□ 0.56
LRRC40Q9H9A6 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.53■□□□□ 0.56
LRRC40Q9H9A6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC40Q9H9A6 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
LRRC40Q9H9A6 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC40Q9H9A6 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC40Q9H9A6 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC40Q9H9A6 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC40Q9H9A6 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC40Q9H9A6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRC40Q9H9A6 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRC40Q9H9A6 PCDHB18P-201ENST00000524813 2368 ntBASIC18.53■□□□□ 0.56
LRRC40Q9H9A6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
LRRC40Q9H9A6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRC40Q9H9A6 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC40Q9H9A6 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 AL024508.2-201ENST00000607749 1894 ntBASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms