Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RNF41Q9H4P4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF41Q9H4P4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RNF41Q9H4P4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
RNF41Q9H4P4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC21.49■■□□□ 1.03
RNF41Q9H4P4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF41Q9H4P4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF41Q9H4P4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.49■■□□□ 1.03
RNF41Q9H4P4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RNF41Q9H4P4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF41Q9H4P4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.49■■□□□ 1.03
RNF41Q9H4P4 AL121672.3-201ENST00000608644 468 ntBASIC21.49■■□□□ 1.03
RNF41Q9H4P4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.49■■□□□ 1.03
RNF41Q9H4P4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.49■■□□□ 1.03
RNF41Q9H4P4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.49■■□□□ 1.03
RNF41Q9H4P4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.49■■□□□ 1.03
RNF41Q9H4P4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF41Q9H4P4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF41Q9H4P4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF41Q9H4P4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF41Q9H4P4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF41Q9H4P4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.48■■□□□ 1.03
RNF41Q9H4P4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RNF41Q9H4P4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
RNF41Q9H4P4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF41Q9H4P4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF41Q9H4P4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF41Q9H4P4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF41Q9H4P4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF41Q9H4P4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.48■■□□□ 1.03
RNF41Q9H4P4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF41Q9H4P4 BX276092.5-203ENST00000456199 560 ntBASIC21.48■■□□□ 1.03
RNF41Q9H4P4 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.48■■□□□ 1.03
RNF41Q9H4P4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
RNF41Q9H4P4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RNF41Q9H4P4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC21.48■■□□□ 1.03
RNF41Q9H4P4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF41Q9H4P4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF41Q9H4P4 AC020763.4-201ENST00000623414 4170 ntBASIC21.48■■□□□ 1.03
RNF41Q9H4P4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.48■■□□□ 1.03
RNF41Q9H4P4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF41Q9H4P4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF41Q9H4P4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
RNF41Q9H4P4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.48■■□□□ 1.03
RNF41Q9H4P4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF41Q9H4P4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF41Q9H4P4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.47■■□□□ 1.03
RNF41Q9H4P4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RNF41Q9H4P4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
RNF41Q9H4P4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.47■■□□□ 1.03
RNF41Q9H4P4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF41Q9H4P4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RNF41Q9H4P4 AC135776.1-201ENST00000319817 2481 ntBASIC21.47■■□□□ 1.03
RNF41Q9H4P4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF41Q9H4P4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RNF41Q9H4P4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.47■■□□□ 1.03
RNF41Q9H4P4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RNF41Q9H4P4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.47■■□□□ 1.03
RNF41Q9H4P4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RNF41Q9H4P4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.47■■□□□ 1.03
RNF41Q9H4P4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
RNF41Q9H4P4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.47■■□□□ 1.03
RNF41Q9H4P4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF41Q9H4P4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
RNF41Q9H4P4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
RNF41Q9H4P4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.47■■□□□ 1.03
RNF41Q9H4P4 AC093010.1-201ENST00000473625 1624 ntBASIC21.47■■□□□ 1.03
RNF41Q9H4P4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF41Q9H4P4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RNF41Q9H4P4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF41Q9H4P4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.46■■□□□ 1.03
RNF41Q9H4P4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
RNF41Q9H4P4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF41Q9H4P4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF41Q9H4P4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RNF41Q9H4P4 AC069148.1-201ENST00000608741 768 ntBASIC21.46■■□□□ 1.03
RNF41Q9H4P4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.46■■□□□ 1.03
RNF41Q9H4P4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.46■■□□□ 1.03
RNF41Q9H4P4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.46■■□□□ 1.03
RNF41Q9H4P4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.46■■□□□ 1.03
RNF41Q9H4P4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
RNF41Q9H4P4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC21.46■■□□□ 1.03
RNF41Q9H4P4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF41Q9H4P4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC21.46■■□□□ 1.03
RNF41Q9H4P4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF41Q9H4P4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC21.46■■□□□ 1.03
RNF41Q9H4P4 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF41Q9H4P4 LINC00602-201ENST00000629776 2065 ntBASIC21.46■■□□□ 1.03
RNF41Q9H4P4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
RNF41Q9H4P4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
RNF41Q9H4P4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF41Q9H4P4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF41Q9H4P4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
RNF41Q9H4P4 LINC00167-201ENST00000530583 1419 ntBASIC21.46■■□□□ 1.03
RNF41Q9H4P4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
RNF41Q9H4P4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF41Q9H4P4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF41Q9H4P4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC21.45■■□□□ 1.02
RNF41Q9H4P4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RNF41Q9H4P4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms