Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 MIR4674-201ENST00000582457 87 ntBASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 KRT8P7-201ENST00000533003 1432 ntBASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHANK2-AS3Q9BTD1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SHANK2-AS3Q9BTD1 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHANK2-AS3Q9BTD1 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SHANK2-AS3Q9BTD1 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHANK2-AS3Q9BTD1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHANK2-AS3Q9BTD1 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SHANK2-AS3Q9BTD1 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHANK2-AS3Q9BTD1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC14.06□□□□□ -0.16
SHANK2-AS3Q9BTD1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHANK2-AS3Q9BTD1 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHANK2-AS3Q9BTD1 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHANK2-AS3Q9BTD1 CRYGFP-201ENST00000418459 633 ntBASIC14.06□□□□□ -0.16
SHANK2-AS3Q9BTD1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC14.06□□□□□ -0.16
SHANK2-AS3Q9BTD1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC14.06□□□□□ -0.16
SHANK2-AS3Q9BTD1 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC14.06□□□□□ -0.16
SHANK2-AS3Q9BTD1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC14.06□□□□□ -0.16
SHANK2-AS3Q9BTD1 NAT14-202ENST00000587400 416 ntTSL 5 BASIC14.06□□□□□ -0.16
SHANK2-AS3Q9BTD1 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC14.06□□□□□ -0.16
SHANK2-AS3Q9BTD1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC14.06□□□□□ -0.16
SHANK2-AS3Q9BTD1 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHANK2-AS3Q9BTD1 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SHANK2-AS3Q9BTD1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHANK2-AS3Q9BTD1 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHANK2-AS3Q9BTD1 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHANK2-AS3Q9BTD1 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SHANK2-AS3Q9BTD1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
SHANK2-AS3Q9BTD1 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.06□□□□□ -0.16
SHANK2-AS3Q9BTD1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SHANK2-AS3Q9BTD1 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.06□□□□□ -0.16
SHANK2-AS3Q9BTD1 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.06□□□□□ -0.16
SHANK2-AS3Q9BTD1 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 AC093010.1-201ENST00000473625 1624 ntBASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 FAM201B-201ENST00000458407 597 ntBASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 AP001412.1-201ENST00000608405 714 ntBASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHANK2-AS3Q9BTD1 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms