Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IFT43Q96FT9 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
IFT43Q96FT9 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.8■□□□□ 0.6
IFT43Q96FT9 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.8■□□□□ 0.6
IFT43Q96FT9 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IFT43Q96FT9 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IFT43Q96FT9 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.8■□□□□ 0.6
IFT43Q96FT9 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IFT43Q96FT9 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IFT43Q96FT9 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
IFT43Q96FT9 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.8■□□□□ 0.6
IFT43Q96FT9 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.8■□□□□ 0.6
IFT43Q96FT9 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.8■□□□□ 0.6
IFT43Q96FT9 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.8■□□□□ 0.6
IFT43Q96FT9 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.8■□□□□ 0.6
IFT43Q96FT9 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
IFT43Q96FT9 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.8■□□□□ 0.6
IFT43Q96FT9 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.8■□□□□ 0.6
IFT43Q96FT9 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
IFT43Q96FT9 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
IFT43Q96FT9 KRT8P45-201ENST00000414328 1447 ntBASIC18.8■□□□□ 0.6
IFT43Q96FT9 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.8■□□□□ 0.6
IFT43Q96FT9 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IFT43Q96FT9 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
IFT43Q96FT9 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IFT43Q96FT9 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IFT43Q96FT9 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IFT43Q96FT9 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.8■□□□□ 0.6
IFT43Q96FT9 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.8■□□□□ 0.6
IFT43Q96FT9 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.79■□□□□ 0.6
IFT43Q96FT9 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.79■□□□□ 0.6
IFT43Q96FT9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
IFT43Q96FT9 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IFT43Q96FT9 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
IFT43Q96FT9 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IFT43Q96FT9 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IFT43Q96FT9 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
IFT43Q96FT9 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IFT43Q96FT9 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.79■□□□□ 0.6
IFT43Q96FT9 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IFT43Q96FT9 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
IFT43Q96FT9 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
IFT43Q96FT9 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
IFT43Q96FT9 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.79■□□□□ 0.6
IFT43Q96FT9 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.79■□□□□ 0.6
IFT43Q96FT9 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IFT43Q96FT9 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.79■□□□□ 0.6
IFT43Q96FT9 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.79■□□□□ 0.6
IFT43Q96FT9 AL121956.5-201ENST00000625261 221 ntBASIC18.79■□□□□ 0.6
IFT43Q96FT9 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
IFT43Q96FT9 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
IFT43Q96FT9 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IFT43Q96FT9 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.79■□□□□ 0.6
IFT43Q96FT9 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
IFT43Q96FT9 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IFT43Q96FT9 AC126763.1-201ENST00000552015 2118 ntBASIC18.79■□□□□ 0.6
IFT43Q96FT9 AC068880.1-201ENST00000507289 2297 ntBASIC18.79■□□□□ 0.6
IFT43Q96FT9 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IFT43Q96FT9 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.78■□□□□ 0.6
IFT43Q96FT9 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IFT43Q96FT9 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
IFT43Q96FT9 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IFT43Q96FT9 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
IFT43Q96FT9 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IFT43Q96FT9 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IFT43Q96FT9 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
IFT43Q96FT9 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
IFT43Q96FT9 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
IFT43Q96FT9 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
IFT43Q96FT9 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IFT43Q96FT9 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
IFT43Q96FT9 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
IFT43Q96FT9 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IFT43Q96FT9 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IFT43Q96FT9 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IFT43Q96FT9 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
IFT43Q96FT9 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IFT43Q96FT9 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
IFT43Q96FT9 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.78■□□□□ 0.6
IFT43Q96FT9 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.78■□□□□ 0.6
IFT43Q96FT9 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
IFT43Q96FT9 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.78■□□□□ 0.6
IFT43Q96FT9 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.78■□□□□ 0.6
IFT43Q96FT9 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.78■□□□□ 0.6
IFT43Q96FT9 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.78■□□□□ 0.6
IFT43Q96FT9 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IFT43Q96FT9 AL358472.4-201ENST00000633140 710 ntBASIC18.78■□□□□ 0.6
IFT43Q96FT9 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
IFT43Q96FT9 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IFT43Q96FT9 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IFT43Q96FT9 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
IFT43Q96FT9 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.78■□□□□ 0.6
IFT43Q96FT9 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
IFT43Q96FT9 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IFT43Q96FT9 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IFT43Q96FT9 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IFT43Q96FT9 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IFT43Q96FT9 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
IFT43Q96FT9 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IFT43Q96FT9 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms