Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.31■□□□□ 0.68
TRIM11Q96F44 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM11Q96F44 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM11Q96F44 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.31■□□□□ 0.68
TRIM11Q96F44 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM11Q96F44 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM11Q96F44 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM11Q96F44 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.31■□□□□ 0.68
TRIM11Q96F44 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM11Q96F44 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM11Q96F44 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM11Q96F44 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM11Q96F44 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM11Q96F44 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.31■□□□□ 0.68
TRIM11Q96F44 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.31■□□□□ 0.68
TRIM11Q96F44 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
TRIM11Q96F44 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM11Q96F44 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM11Q96F44 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM11Q96F44 TSPY15P-201ENST00000457163 923 ntBASIC19.31■□□□□ 0.68
TRIM11Q96F44 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.31■□□□□ 0.68
TRIM11Q96F44 SEC1P-202ENST00000473944 940 ntBASIC19.31■□□□□ 0.68
TRIM11Q96F44 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.31■□□□□ 0.68
TRIM11Q96F44 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.31■□□□□ 0.68
TRIM11Q96F44 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.31■□□□□ 0.68
TRIM11Q96F44 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM11Q96F44 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.31■□□□□ 0.68
TRIM11Q96F44 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.31■□□□□ 0.68
TRIM11Q96F44 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.31■□□□□ 0.68
TRIM11Q96F44 AC008687.5-201ENST00000593746 558 ntBASIC19.31■□□□□ 0.68
TRIM11Q96F44 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM11Q96F44 FAM87A-204ENST00000613235 858 ntBASIC19.31■□□□□ 0.68
TRIM11Q96F44 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TRIM11Q96F44 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM11Q96F44 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM11Q96F44 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM11Q96F44 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM11Q96F44 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.31■□□□□ 0.68
TRIM11Q96F44 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM11Q96F44 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.31■□□□□ 0.68
TRIM11Q96F44 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM11Q96F44 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM11Q96F44 AL024508.2-201ENST00000607749 1894 ntBASIC19.31■□□□□ 0.68
TRIM11Q96F44 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TRIM11Q96F44 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.3■□□□□ 0.68
TRIM11Q96F44 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM11Q96F44 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.3■□□□□ 0.68
TRIM11Q96F44 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM11Q96F44 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TRIM11Q96F44 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TRIM11Q96F44 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM11Q96F44 LINC01126-201ENST00000623515 1646 ntBASIC19.3■□□□□ 0.68
TRIM11Q96F44 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.3■□□□□ 0.68
TRIM11Q96F44 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TRIM11Q96F44 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM11Q96F44 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM11Q96F44 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM11Q96F44 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.3■□□□□ 0.68
TRIM11Q96F44 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.3■□□□□ 0.68
TRIM11Q96F44 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM11Q96F44 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.3■□□□□ 0.68
TRIM11Q96F44 AC092865.7-201ENST00000641832 219 ntBASIC19.3■□□□□ 0.68
TRIM11Q96F44 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
TRIM11Q96F44 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM11Q96F44 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM11Q96F44 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM11Q96F44 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.3■□□□□ 0.68
TRIM11Q96F44 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM11Q96F44 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM11Q96F44 OR6D1P-202ENST00000641007 5290 ntBASIC19.3■□□□□ 0.68
TRIM11Q96F44 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM11Q96F44 AC099343.3-201ENST00000605834 2503 ntBASIC19.29■□□□□ 0.68
TRIM11Q96F44 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM11Q96F44 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
TRIM11Q96F44 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
TRIM11Q96F44 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM11Q96F44 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.29■□□□□ 0.68
TRIM11Q96F44 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM11Q96F44 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM11Q96F44 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM11Q96F44 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM11Q96F44 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.29■□□□□ 0.68
TRIM11Q96F44 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM11Q96F44 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TRIM11Q96F44 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM11Q96F44 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TRIM11Q96F44 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM11Q96F44 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.29■□□□□ 0.68
TRIM11Q96F44 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.29■□□□□ 0.68
TRIM11Q96F44 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.29■□□□□ 0.68
TRIM11Q96F44 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.29■□□□□ 0.68
TRIM11Q96F44 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.29■□□□□ 0.68
TRIM11Q96F44 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM11Q96F44 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.29■□□□□ 0.68
TRIM11Q96F44 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM11Q96F44 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM11Q96F44 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM11Q96F44 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
TRIM11Q96F44 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.29■□□□□ 0.68
TRIM11Q96F44 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms