Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.9■□□□□ 0.3
CTHRC1Q96CG8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTHRC1Q96CG8 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTHRC1Q96CG8 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTHRC1Q96CG8 IGHGP-201ENST00000390555 1178 ntBASIC16.9■□□□□ 0.3
CTHRC1Q96CG8 AL031133.1-201ENST00000406807 723 ntBASIC16.9■□□□□ 0.3
CTHRC1Q96CG8 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.9■□□□□ 0.3
CTHRC1Q96CG8 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.9■□□□□ 0.3
CTHRC1Q96CG8 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.9■□□□□ 0.3
CTHRC1Q96CG8 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.9■□□□□ 0.3
CTHRC1Q96CG8 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTHRC1Q96CG8 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.9■□□□□ 0.3
CTHRC1Q96CG8 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.9■□□□□ 0.3
CTHRC1Q96CG8 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.9■□□□□ 0.3
CTHRC1Q96CG8 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
CTHRC1Q96CG8 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.9■□□□□ 0.3
CTHRC1Q96CG8 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CTHRC1Q96CG8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.9■□□□□ 0.3
CTHRC1Q96CG8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
CTHRC1Q96CG8 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTHRC1Q96CG8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
CTHRC1Q96CG8 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
CTHRC1Q96CG8 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTHRC1Q96CG8 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTHRC1Q96CG8 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTHRC1Q96CG8 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTHRC1Q96CG8 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CTHRC1Q96CG8 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 AP003733.1-201ENST00000491725 852 ntBASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 AL136038.3-201ENST00000561909 1096 ntBASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 NTF6B-201ENST00000591913 560 ntBASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 AC007613.1-201ENST00000572811 2597 ntBASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 AP000997.3-201ENST00000623333 2250 ntBASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 LINC00602-201ENST00000629776 2065 ntBASIC16.89■□□□□ 0.29
CTHRC1Q96CG8 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CTHRC1Q96CG8 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.88■□□□□ 0.29
CTHRC1Q96CG8 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CTHRC1Q96CG8 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
CTHRC1Q96CG8 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTHRC1Q96CG8 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTHRC1Q96CG8 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTHRC1Q96CG8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CTHRC1Q96CG8 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTHRC1Q96CG8 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CTHRC1Q96CG8 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CTHRC1Q96CG8 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTHRC1Q96CG8 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTHRC1Q96CG8 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.88■□□□□ 0.29
CTHRC1Q96CG8 SLC25A6P5-201ENST00000435663 894 ntBASIC16.88■□□□□ 0.29
CTHRC1Q96CG8 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.88■□□□□ 0.29
CTHRC1Q96CG8 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CTHRC1Q96CG8 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.88■□□□□ 0.29
CTHRC1Q96CG8 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.88■□□□□ 0.29
CTHRC1Q96CG8 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.88■□□□□ 0.29
CTHRC1Q96CG8 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.88■□□□□ 0.29
CTHRC1Q96CG8 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTHRC1Q96CG8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.88■□□□□ 0.29
CTHRC1Q96CG8 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.88■□□□□ 0.29
CTHRC1Q96CG8 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms