Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.16■□□□□ 0.18
APH1AQ96BI3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
APH1AQ96BI3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.16■□□□□ 0.18
APH1AQ96BI3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
APH1AQ96BI3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APH1AQ96BI3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APH1AQ96BI3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APH1AQ96BI3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
APH1AQ96BI3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APH1AQ96BI3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
APH1AQ96BI3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
APH1AQ96BI3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.15■□□□□ 0.18
APH1AQ96BI3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
APH1AQ96BI3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
APH1AQ96BI3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
APH1AQ96BI3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
APH1AQ96BI3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.15■□□□□ 0.18
APH1AQ96BI3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.15■□□□□ 0.18
APH1AQ96BI3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APH1AQ96BI3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APH1AQ96BI3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
APH1AQ96BI3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
APH1AQ96BI3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APH1AQ96BI3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
APH1AQ96BI3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
APH1AQ96BI3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.15■□□□□ 0.18
APH1AQ96BI3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
APH1AQ96BI3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.15■□□□□ 0.18
APH1AQ96BI3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APH1AQ96BI3 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.15■□□□□ 0.18
APH1AQ96BI3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.15■□□□□ 0.18
APH1AQ96BI3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.15■□□□□ 0.18
APH1AQ96BI3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.15■□□□□ 0.18
APH1AQ96BI3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.15■□□□□ 0.18
APH1AQ96BI3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.15■□□□□ 0.18
APH1AQ96BI3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.15■□□□□ 0.18
APH1AQ96BI3 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.15■□□□□ 0.18
APH1AQ96BI3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
APH1AQ96BI3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.15■□□□□ 0.18
APH1AQ96BI3 AC116407.4-201ENST00000623319 1061 ntBASIC16.15■□□□□ 0.18
APH1AQ96BI3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
APH1AQ96BI3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
APH1AQ96BI3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.15■□□□□ 0.18
APH1AQ96BI3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.15■□□□□ 0.18
APH1AQ96BI3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APH1AQ96BI3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
APH1AQ96BI3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.14■□□□□ 0.17
APH1AQ96BI3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
APH1AQ96BI3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
APH1AQ96BI3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
APH1AQ96BI3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.14■□□□□ 0.17
APH1AQ96BI3 AL024508.2-201ENST00000607749 1894 ntBASIC16.14■□□□□ 0.17
APH1AQ96BI3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
APH1AQ96BI3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
APH1AQ96BI3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
APH1AQ96BI3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.14■□□□□ 0.17
APH1AQ96BI3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
APH1AQ96BI3 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
APH1AQ96BI3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.14■□□□□ 0.17
APH1AQ96BI3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
APH1AQ96BI3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
APH1AQ96BI3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.14■□□□□ 0.17
APH1AQ96BI3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
APH1AQ96BI3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
APH1AQ96BI3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.14■□□□□ 0.17
APH1AQ96BI3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
APH1AQ96BI3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.14■□□□□ 0.17
APH1AQ96BI3 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.14■□□□□ 0.17
APH1AQ96BI3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
APH1AQ96BI3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.14■□□□□ 0.17
APH1AQ96BI3 AC011498.5-201ENST00000592027 486 ntBASIC16.14■□□□□ 0.17
APH1AQ96BI3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
APH1AQ96BI3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.14■□□□□ 0.17
APH1AQ96BI3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.14■□□□□ 0.17
APH1AQ96BI3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.14■□□□□ 0.17
APH1AQ96BI3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
APH1AQ96BI3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
APH1AQ96BI3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
APH1AQ96BI3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
APH1AQ96BI3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.14■□□□□ 0.17
APH1AQ96BI3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
APH1AQ96BI3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.14■□□□□ 0.17
APH1AQ96BI3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.14■□□□□ 0.17
APH1AQ96BI3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.14■□□□□ 0.17
APH1AQ96BI3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
APH1AQ96BI3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
APH1AQ96BI3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.14■□□□□ 0.17
APH1AQ96BI3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
APH1AQ96BI3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
APH1AQ96BI3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
APH1AQ96BI3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
APH1AQ96BI3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.13■□□□□ 0.17
APH1AQ96BI3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
APH1AQ96BI3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
APH1AQ96BI3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
APH1AQ96BI3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
APH1AQ96BI3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
APH1AQ96BI3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.13■□□□□ 0.17
APH1AQ96BI3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.13■□□□□ 0.17
APH1AQ96BI3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms