Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 AL357033.4-201ENST00000617703 1807 ntBASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SH3KBP1Q96B97 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SH3KBP1Q96B97 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.08■□□□□ 0.49
SH3KBP1Q96B97 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.08■□□□□ 0.49
SH3KBP1Q96B97 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.08■□□□□ 0.49
SH3KBP1Q96B97 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
SH3KBP1Q96B97 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SH3KBP1Q96B97 AC104390.1-201ENST00000555663 520 ntBASIC18.08■□□□□ 0.48
SH3KBP1Q96B97 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
SH3KBP1Q96B97 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SH3KBP1Q96B97 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
SH3KBP1Q96B97 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SH3KBP1Q96B97 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SH3KBP1Q96B97 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.08■□□□□ 0.48
SH3KBP1Q96B97 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SH3KBP1Q96B97 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SH3KBP1Q96B97 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.08■□□□□ 0.48
SH3KBP1Q96B97 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SH3KBP1Q96B97 AC093525.10-201ENST00000625130 1569 ntBASIC18.08■□□□□ 0.48
SH3KBP1Q96B97 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SH3KBP1Q96B97 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SH3KBP1Q96B97 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.07■□□□□ 0.48
SH3KBP1Q96B97 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.07■□□□□ 0.48
SH3KBP1Q96B97 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.07■□□□□ 0.48
SH3KBP1Q96B97 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.07■□□□□ 0.48
SH3KBP1Q96B97 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SH3KBP1Q96B97 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SH3KBP1Q96B97 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.07■□□□□ 0.48
SH3KBP1Q96B97 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SH3KBP1Q96B97 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SH3KBP1Q96B97 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SH3KBP1Q96B97 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.07■□□□□ 0.48
SH3KBP1Q96B97 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.07■□□□□ 0.48
SH3KBP1Q96B97 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.07■□□□□ 0.48
SH3KBP1Q96B97 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SH3KBP1Q96B97 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SH3KBP1Q96B97 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SH3KBP1Q96B97 MIR3180-4-201ENST00000582223 153 ntBASIC18.07■□□□□ 0.48
SH3KBP1Q96B97 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.07■□□□□ 0.48
SH3KBP1Q96B97 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SH3KBP1Q96B97 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SH3KBP1Q96B97 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SH3KBP1Q96B97 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SH3KBP1Q96B97 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SH3KBP1Q96B97 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.07■□□□□ 0.48
SH3KBP1Q96B97 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SH3KBP1Q96B97 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
SH3KBP1Q96B97 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.07■□□□□ 0.48
SH3KBP1Q96B97 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SH3KBP1Q96B97 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
SH3KBP1Q96B97 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH3KBP1Q96B97 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.06■□□□□ 0.48
SH3KBP1Q96B97 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH3KBP1Q96B97 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH3KBP1Q96B97 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH3KBP1Q96B97 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SH3KBP1Q96B97 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SH3KBP1Q96B97 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH3KBP1Q96B97 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH3KBP1Q96B97 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
SH3KBP1Q96B97 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH3KBP1Q96B97 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.06■□□□□ 0.48
SH3KBP1Q96B97 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SH3KBP1Q96B97 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.06■□□□□ 0.48
SH3KBP1Q96B97 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.06■□□□□ 0.48
SH3KBP1Q96B97 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.06■□□□□ 0.48
SH3KBP1Q96B97 AC009065.1-201ENST00000564055 1225 ntBASIC18.06■□□□□ 0.48
SH3KBP1Q96B97 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH3KBP1Q96B97 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SH3KBP1Q96B97 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.06■□□□□ 0.48
SH3KBP1Q96B97 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH3KBP1Q96B97 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH3KBP1Q96B97 MTMR9LP-203ENST00000426597 1545 ntBASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms