Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.94■□□□□ 0.62
ATG4AQ8WYN0 CR769767.2-201ENST00000622735 460 ntBASIC18.94■□□□□ 0.62
ATG4AQ8WYN0 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.94■□□□□ 0.62
ATG4AQ8WYN0 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATG4AQ8WYN0 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.94■□□□□ 0.62
ATG4AQ8WYN0 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.94■□□□□ 0.62
ATG4AQ8WYN0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATG4AQ8WYN0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATG4AQ8WYN0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATG4AQ8WYN0 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATG4AQ8WYN0 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATG4AQ8WYN0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
ATG4AQ8WYN0 LINC01126-201ENST00000623515 1646 ntBASIC18.93■□□□□ 0.62
ATG4AQ8WYN0 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.93■□□□□ 0.62
ATG4AQ8WYN0 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
ATG4AQ8WYN0 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
ATG4AQ8WYN0 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATG4AQ8WYN0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.93■□□□□ 0.62
ATG4AQ8WYN0 RBM17P1-201ENST00000453646 1190 ntBASIC18.93■□□□□ 0.62
ATG4AQ8WYN0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.93■□□□□ 0.62
ATG4AQ8WYN0 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
ATG4AQ8WYN0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.93■□□□□ 0.62
ATG4AQ8WYN0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATG4AQ8WYN0 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.93■□□□□ 0.62
ATG4AQ8WYN0 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
ATG4AQ8WYN0 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.93■□□□□ 0.62
ATG4AQ8WYN0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATG4AQ8WYN0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATG4AQ8WYN0 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATG4AQ8WYN0 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATG4AQ8WYN0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.93■□□□□ 0.62
ATG4AQ8WYN0 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATG4AQ8WYN0 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.93■□□□□ 0.62
ATG4AQ8WYN0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATG4AQ8WYN0 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATG4AQ8WYN0 HOXB1-202ENST00000577092 1414 ntBASIC18.92■□□□□ 0.62
ATG4AQ8WYN0 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ATG4AQ8WYN0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATG4AQ8WYN0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATG4AQ8WYN0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATG4AQ8WYN0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATG4AQ8WYN0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATG4AQ8WYN0 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATG4AQ8WYN0 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATG4AQ8WYN0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.92■□□□□ 0.62
ATG4AQ8WYN0 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATG4AQ8WYN0 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATG4AQ8WYN0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATG4AQ8WYN0 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATG4AQ8WYN0 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATG4AQ8WYN0 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATG4AQ8WYN0 AL390955.1-201ENST00000428694 934 ntBASIC18.92■□□□□ 0.62
ATG4AQ8WYN0 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.92■□□□□ 0.62
ATG4AQ8WYN0 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.92■□□□□ 0.62
ATG4AQ8WYN0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ATG4AQ8WYN0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATG4AQ8WYN0 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATG4AQ8WYN0 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATG4AQ8WYN0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
ATG4AQ8WYN0 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATG4AQ8WYN0 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ATG4AQ8WYN0 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATG4AQ8WYN0 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
ATG4AQ8WYN0 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATG4AQ8WYN0 AC012313.1-201ENST00000593393 3059 ntBASIC18.92■□□□□ 0.62
ATG4AQ8WYN0 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ATG4AQ8WYN0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATG4AQ8WYN0 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATG4AQ8WYN0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.91■□□□□ 0.62
ATG4AQ8WYN0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATG4AQ8WYN0 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATG4AQ8WYN0 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATG4AQ8WYN0 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.91■□□□□ 0.62
ATG4AQ8WYN0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.91■□□□□ 0.62
ATG4AQ8WYN0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATG4AQ8WYN0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.91■□□□□ 0.62
ATG4AQ8WYN0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ATG4AQ8WYN0 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATG4AQ8WYN0 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATG4AQ8WYN0 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.91■□□□□ 0.62
ATG4AQ8WYN0 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
ATG4AQ8WYN0 TSPY7P-201ENST00000431358 1114 ntBASIC18.91■□□□□ 0.62
ATG4AQ8WYN0 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATG4AQ8WYN0 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.91■□□□□ 0.62
ATG4AQ8WYN0 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.91■□□□□ 0.62
ATG4AQ8WYN0 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.91■□□□□ 0.62
ATG4AQ8WYN0 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATG4AQ8WYN0 AP000525.1-201ENST00000608286 694 ntBASIC18.91■□□□□ 0.62
ATG4AQ8WYN0 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.91■□□□□ 0.62
ATG4AQ8WYN0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATG4AQ8WYN0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.91■□□□□ 0.62
ATG4AQ8WYN0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.91■□□□□ 0.62
ATG4AQ8WYN0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.91■□□□□ 0.62
ATG4AQ8WYN0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ATG4AQ8WYN0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATG4AQ8WYN0 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ATG4AQ8WYN0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.91■□□□□ 0.62
ATG4AQ8WYN0 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATG4AQ8WYN0 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
ATG4AQ8WYN0 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms