Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF139Q8WU17 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.16■□□□□ 0.66
RNF139Q8WU17 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF139Q8WU17 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.16■□□□□ 0.66
RNF139Q8WU17 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.16■□□□□ 0.66
RNF139Q8WU17 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF139Q8WU17 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF139Q8WU17 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF139Q8WU17 RNF165-205ENST00000588679 2904 ntBASIC19.16■□□□□ 0.66
RNF139Q8WU17 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF139Q8WU17 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.16■□□□□ 0.66
RNF139Q8WU17 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF139Q8WU17 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RNF139Q8WU17 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF139Q8WU17 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
RNF139Q8WU17 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF139Q8WU17 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF139Q8WU17 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
RNF139Q8WU17 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RNF139Q8WU17 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.15■□□□□ 0.66
RNF139Q8WU17 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF139Q8WU17 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF139Q8WU17 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF139Q8WU17 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF139Q8WU17 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF139Q8WU17 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RNF139Q8WU17 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF139Q8WU17 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.15■□□□□ 0.66
RNF139Q8WU17 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.15■□□□□ 0.66
RNF139Q8WU17 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF139Q8WU17 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF139Q8WU17 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF139Q8WU17 MIR662-201ENST00000384847 95 ntBASIC19.15■□□□□ 0.66
RNF139Q8WU17 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.15■□□□□ 0.66
RNF139Q8WU17 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RNF139Q8WU17 KRT18P48-201ENST00000434763 852 ntBASIC19.15■□□□□ 0.66
RNF139Q8WU17 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.15■□□□□ 0.66
RNF139Q8WU17 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF139Q8WU17 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.15■□□□□ 0.66
RNF139Q8WU17 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.15■□□□□ 0.66
RNF139Q8WU17 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
RNF139Q8WU17 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RNF139Q8WU17 AC024563.2-201ENST00000603282 481 ntBASIC19.15■□□□□ 0.66
RNF139Q8WU17 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
RNF139Q8WU17 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF139Q8WU17 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF139Q8WU17 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.15■□□□□ 0.66
RNF139Q8WU17 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF139Q8WU17 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.15■□□□□ 0.66
RNF139Q8WU17 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RNF139Q8WU17 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF139Q8WU17 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF139Q8WU17 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RNF139Q8WU17 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RNF139Q8WU17 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.14■□□□□ 0.66
RNF139Q8WU17 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RNF139Q8WU17 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
RNF139Q8WU17 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF139Q8WU17 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
RNF139Q8WU17 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF139Q8WU17 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
RNF139Q8WU17 SDHAP2-201ENST00000455183 2001 ntBASIC19.14■□□□□ 0.65
RNF139Q8WU17 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF139Q8WU17 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF139Q8WU17 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF139Q8WU17 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF139Q8WU17 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.14■□□□□ 0.65
RNF139Q8WU17 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.14■□□□□ 0.65
RNF139Q8WU17 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF139Q8WU17 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.14■□□□□ 0.65
RNF139Q8WU17 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.14■□□□□ 0.65
RNF139Q8WU17 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF139Q8WU17 AC116407.4-201ENST00000623319 1061 ntBASIC19.14■□□□□ 0.65
RNF139Q8WU17 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF139Q8WU17 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF139Q8WU17 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.14■□□□□ 0.65
RNF139Q8WU17 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.14■□□□□ 0.65
RNF139Q8WU17 NEFHP1-201ENST00000412845 2629 ntBASIC19.14■□□□□ 0.65
RNF139Q8WU17 AL162741.1-201ENST00000565563 1558 ntBASIC19.14■□□□□ 0.65
RNF139Q8WU17 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.14■□□□□ 0.65
RNF139Q8WU17 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF139Q8WU17 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF139Q8WU17 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF139Q8WU17 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF139Q8WU17 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF139Q8WU17 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF139Q8WU17 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
RNF139Q8WU17 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
RNF139Q8WU17 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF139Q8WU17 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
RNF139Q8WU17 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF139Q8WU17 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF139Q8WU17 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF139Q8WU17 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF139Q8WU17 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
RNF139Q8WU17 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF139Q8WU17 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF139Q8WU17 AC008687.5-201ENST00000593746 558 ntBASIC19.13■□□□□ 0.65
RNF139Q8WU17 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.13■□□□□ 0.65
RNF139Q8WU17 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms