Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SH3RF2Q8TEC5 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SH3RF2Q8TEC5 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SH3RF2Q8TEC5 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.89■□□□□ 0.61
SH3RF2Q8TEC5 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SH3RF2Q8TEC5 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SH3RF2Q8TEC5 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SH3RF2Q8TEC5 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
SH3RF2Q8TEC5 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SH3RF2Q8TEC5 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.89■□□□□ 0.61
SH3RF2Q8TEC5 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.89■□□□□ 0.61
SH3RF2Q8TEC5 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.89■□□□□ 0.61
SH3RF2Q8TEC5 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.89■□□□□ 0.61
SH3RF2Q8TEC5 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SH3RF2Q8TEC5 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
SH3RF2Q8TEC5 AC113404.2-201ENST00000507884 177 ntBASIC18.89■□□□□ 0.61
SH3RF2Q8TEC5 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SH3RF2Q8TEC5 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.89■□□□□ 0.61
SH3RF2Q8TEC5 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.89■□□□□ 0.61
SH3RF2Q8TEC5 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SH3RF2Q8TEC5 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SH3RF2Q8TEC5 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.89■□□□□ 0.61
SH3RF2Q8TEC5 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SH3RF2Q8TEC5 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.89■□□□□ 0.61
SH3RF2Q8TEC5 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SH3RF2Q8TEC5 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SH3RF2Q8TEC5 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SH3RF2Q8TEC5 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH3RF2Q8TEC5 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH3RF2Q8TEC5 AL024508.2-201ENST00000607749 1894 ntBASIC18.88■□□□□ 0.61
SH3RF2Q8TEC5 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SH3RF2Q8TEC5 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH3RF2Q8TEC5 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH3RF2Q8TEC5 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
SH3RF2Q8TEC5 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH3RF2Q8TEC5 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH3RF2Q8TEC5 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH3RF2Q8TEC5 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SH3RF2Q8TEC5 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH3RF2Q8TEC5 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH3RF2Q8TEC5 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH3RF2Q8TEC5 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH3RF2Q8TEC5 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
SH3RF2Q8TEC5 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH3RF2Q8TEC5 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH3RF2Q8TEC5 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH3RF2Q8TEC5 FDX1P1-201ENST00000449115 551 ntBASIC18.88■□□□□ 0.61
SH3RF2Q8TEC5 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SH3RF2Q8TEC5 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SH3RF2Q8TEC5 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH3RF2Q8TEC5 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.88■□□□□ 0.61
SH3RF2Q8TEC5 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.88■□□□□ 0.61
SH3RF2Q8TEC5 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SH3RF2Q8TEC5 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.88■□□□□ 0.61
SH3RF2Q8TEC5 KRT8P10-201ENST00000450021 1447 ntBASIC18.88■□□□□ 0.61
SH3RF2Q8TEC5 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SH3RF2Q8TEC5 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH3RF2Q8TEC5 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH3RF2Q8TEC5 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.88■□□□□ 0.61
SH3RF2Q8TEC5 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH3RF2Q8TEC5 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH3RF2Q8TEC5 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SH3RF2Q8TEC5 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.88■□□□□ 0.61
SH3RF2Q8TEC5 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SH3RF2Q8TEC5 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SH3RF2Q8TEC5 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SH3RF2Q8TEC5 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SH3RF2Q8TEC5 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SH3RF2Q8TEC5 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SH3RF2Q8TEC5 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SH3RF2Q8TEC5 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SH3RF2Q8TEC5 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SH3RF2Q8TEC5 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SH3RF2Q8TEC5 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SH3RF2Q8TEC5 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SH3RF2Q8TEC5 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SH3RF2Q8TEC5 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SH3RF2Q8TEC5 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.87■□□□□ 0.61
SH3RF2Q8TEC5 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.87■□□□□ 0.61
SH3RF2Q8TEC5 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.87■□□□□ 0.61
SH3RF2Q8TEC5 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.87■□□□□ 0.61
SH3RF2Q8TEC5 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SH3RF2Q8TEC5 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SH3RF2Q8TEC5 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SH3RF2Q8TEC5 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
SH3RF2Q8TEC5 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.87■□□□□ 0.61
SH3RF2Q8TEC5 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SH3RF2Q8TEC5 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SH3RF2Q8TEC5 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SH3RF2Q8TEC5 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SH3RF2Q8TEC5 MINOS1P3-201ENST00000457048 203 ntBASIC18.87■□□□□ 0.61
SH3RF2Q8TEC5 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.87■□□□□ 0.61
SH3RF2Q8TEC5 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.87■□□□□ 0.61
SH3RF2Q8TEC5 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SH3RF2Q8TEC5 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.87■□□□□ 0.61
SH3RF2Q8TEC5 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.87■□□□□ 0.61
SH3RF2Q8TEC5 AL031008.1-201ENST00000619963 541 ntBASIC18.87■□□□□ 0.61
SH3RF2Q8TEC5 NEFHP1-201ENST00000412845 2629 ntBASIC18.87■□□□□ 0.61
SH3RF2Q8TEC5 AC104581.1-202ENST00000635932 2618 ntBASIC18.87■□□□□ 0.61
SH3RF2Q8TEC5 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms