Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAF3IP1Q8TDR0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAF3IP1Q8TDR0 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.04■□□□□ 0.64
TRAF3IP1Q8TDR0 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.04■□□□□ 0.64
TRAF3IP1Q8TDR0 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAF3IP1Q8TDR0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.04■□□□□ 0.64
TRAF3IP1Q8TDR0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.04■□□□□ 0.64
TRAF3IP1Q8TDR0 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.04■□□□□ 0.64
TRAF3IP1Q8TDR0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAF3IP1Q8TDR0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAF3IP1Q8TDR0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TRAF3IP1Q8TDR0 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRAF3IP1Q8TDR0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TRAF3IP1Q8TDR0 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAF3IP1Q8TDR0 KRT8P9-201ENST00000558927 1449 ntBASIC19.04■□□□□ 0.64
TRAF3IP1Q8TDR0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
TRAF3IP1Q8TDR0 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRAF3IP1Q8TDR0 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.04■□□□□ 0.64
TRAF3IP1Q8TDR0 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.04■□□□□ 0.64
TRAF3IP1Q8TDR0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.04■□□□□ 0.64
TRAF3IP1Q8TDR0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.04■□□□□ 0.64
TRAF3IP1Q8TDR0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.04■□□□□ 0.64
TRAF3IP1Q8TDR0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAF3IP1Q8TDR0 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
TRAF3IP1Q8TDR0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.04■□□□□ 0.64
TRAF3IP1Q8TDR0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRAF3IP1Q8TDR0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
TRAF3IP1Q8TDR0 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRAF3IP1Q8TDR0 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAF3IP1Q8TDR0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.04■□□□□ 0.64
TRAF3IP1Q8TDR0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAF3IP1Q8TDR0 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAF3IP1Q8TDR0 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAF3IP1Q8TDR0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAF3IP1Q8TDR0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.03■□□□□ 0.64
TRAF3IP1Q8TDR0 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAF3IP1Q8TDR0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TRAF3IP1Q8TDR0 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAF3IP1Q8TDR0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAF3IP1Q8TDR0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.03■□□□□ 0.64
TRAF3IP1Q8TDR0 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAF3IP1Q8TDR0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.03■□□□□ 0.64
TRAF3IP1Q8TDR0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TRAF3IP1Q8TDR0 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAF3IP1Q8TDR0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAF3IP1Q8TDR0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAF3IP1Q8TDR0 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.03■□□□□ 0.64
TRAF3IP1Q8TDR0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAF3IP1Q8TDR0 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.03■□□□□ 0.64
TRAF3IP1Q8TDR0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAF3IP1Q8TDR0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.03■□□□□ 0.64
TRAF3IP1Q8TDR0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAF3IP1Q8TDR0 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.03■□□□□ 0.64
TRAF3IP1Q8TDR0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAF3IP1Q8TDR0 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.03■□□□□ 0.64
TRAF3IP1Q8TDR0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
TRAF3IP1Q8TDR0 AC010947.1-201ENST00000623454 693 ntBASIC19.03■□□□□ 0.64
TRAF3IP1Q8TDR0 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.03■□□□□ 0.64
TRAF3IP1Q8TDR0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.03■□□□□ 0.64
TRAF3IP1Q8TDR0 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAF3IP1Q8TDR0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.03■□□□□ 0.64
TRAF3IP1Q8TDR0 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAF3IP1Q8TDR0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAF3IP1Q8TDR0 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.03■□□□□ 0.64
TRAF3IP1Q8TDR0 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
TRAF3IP1Q8TDR0 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRAF3IP1Q8TDR0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAF3IP1Q8TDR0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
TRAF3IP1Q8TDR0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.02■□□□□ 0.64
TRAF3IP1Q8TDR0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.02■□□□□ 0.64
TRAF3IP1Q8TDR0 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAF3IP1Q8TDR0 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRAF3IP1Q8TDR0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAF3IP1Q8TDR0 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.02■□□□□ 0.64
TRAF3IP1Q8TDR0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAF3IP1Q8TDR0 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.02■□□□□ 0.64
TRAF3IP1Q8TDR0 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.02■□□□□ 0.64
TRAF3IP1Q8TDR0 INGX-201ENST00000359239 846 ntBASIC19.02■□□□□ 0.64
TRAF3IP1Q8TDR0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
TRAF3IP1Q8TDR0 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRAF3IP1Q8TDR0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAF3IP1Q8TDR0 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.02■□□□□ 0.64
TRAF3IP1Q8TDR0 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRAF3IP1Q8TDR0 AL512604.3-201ENST00000569583 964 ntBASIC19.02■□□□□ 0.64
TRAF3IP1Q8TDR0 REXO1L9P-201ENST00000604264 2108 ntBASIC19.02■□□□□ 0.64
TRAF3IP1Q8TDR0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRAF3IP1Q8TDR0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAF3IP1Q8TDR0 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRAF3IP1Q8TDR0 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRAF3IP1Q8TDR0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAF3IP1Q8TDR0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAF3IP1Q8TDR0 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRAF3IP1Q8TDR0 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRAF3IP1Q8TDR0 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
TRAF3IP1Q8TDR0 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRAF3IP1Q8TDR0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TRAF3IP1Q8TDR0 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.02■□□□□ 0.63
TRAF3IP1Q8TDR0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
TRAF3IP1Q8TDR0 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
TRAF3IP1Q8TDR0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms