Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CPEB3Q8NE35 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CPEB3Q8NE35 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CPEB3Q8NE35 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPEB3Q8NE35 AC135050.7-201ENST00000624508 2218 ntBASIC15.98■□□□□ 0.15
CPEB3Q8NE35 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CPEB3Q8NE35 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPEB3Q8NE35 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPEB3Q8NE35 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CPEB3Q8NE35 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPEB3Q8NE35 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.98■□□□□ 0.15
CPEB3Q8NE35 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CPEB3Q8NE35 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPEB3Q8NE35 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.98■□□□□ 0.15
CPEB3Q8NE35 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPEB3Q8NE35 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.98■□□□□ 0.15
CPEB3Q8NE35 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.98■□□□□ 0.15
CPEB3Q8NE35 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CPEB3Q8NE35 RASA4DP-201ENST00000460726 1199 ntBASIC15.98■□□□□ 0.15
CPEB3Q8NE35 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CPEB3Q8NE35 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CPEB3Q8NE35 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CPEB3Q8NE35 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.98■□□□□ 0.15
CPEB3Q8NE35 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.98■□□□□ 0.15
CPEB3Q8NE35 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPEB3Q8NE35 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPEB3Q8NE35 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.98■□□□□ 0.15
CPEB3Q8NE35 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.98■□□□□ 0.15
CPEB3Q8NE35 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CPEB3Q8NE35 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPEB3Q8NE35 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPEB3Q8NE35 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPEB3Q8NE35 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPEB3Q8NE35 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.97■□□□□ 0.15
CPEB3Q8NE35 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPEB3Q8NE35 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPEB3Q8NE35 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPEB3Q8NE35 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPEB3Q8NE35 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.97■□□□□ 0.15
CPEB3Q8NE35 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
CPEB3Q8NE35 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CPEB3Q8NE35 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPEB3Q8NE35 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CPEB3Q8NE35 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.97■□□□□ 0.15
CPEB3Q8NE35 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CPEB3Q8NE35 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPEB3Q8NE35 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.97■□□□□ 0.15
CPEB3Q8NE35 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.97■□□□□ 0.15
CPEB3Q8NE35 AC034232.1-201ENST00000506026 1064 ntBASIC15.97■□□□□ 0.15
CPEB3Q8NE35 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.97■□□□□ 0.15
CPEB3Q8NE35 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.97■□□□□ 0.15
CPEB3Q8NE35 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CPEB3Q8NE35 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
CPEB3Q8NE35 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.97■□□□□ 0.15
CPEB3Q8NE35 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
CPEB3Q8NE35 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CPEB3Q8NE35 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPEB3Q8NE35 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CPEB3Q8NE35 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CPEB3Q8NE35 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPEB3Q8NE35 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPEB3Q8NE35 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CPEB3Q8NE35 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CPEB3Q8NE35 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPEB3Q8NE35 GMCL1P1-201ENST00000463439 1581 ntBASIC15.96■□□□□ 0.15
CPEB3Q8NE35 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPEB3Q8NE35 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CPEB3Q8NE35 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPEB3Q8NE35 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPEB3Q8NE35 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CPEB3Q8NE35 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CPEB3Q8NE35 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPEB3Q8NE35 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPEB3Q8NE35 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CPEB3Q8NE35 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CPEB3Q8NE35 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CPEB3Q8NE35 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPEB3Q8NE35 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CPEB3Q8NE35 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPEB3Q8NE35 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPEB3Q8NE35 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CPEB3Q8NE35 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CPEB3Q8NE35 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPEB3Q8NE35 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
CPEB3Q8NE35 STARP1-201ENST00000397973 869 ntBASIC15.96■□□□□ 0.15
CPEB3Q8NE35 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CPEB3Q8NE35 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CPEB3Q8NE35 SPDYE15P-201ENST00000424157 909 ntBASIC15.96■□□□□ 0.15
CPEB3Q8NE35 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.96■□□□□ 0.15
CPEB3Q8NE35 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.96■□□□□ 0.15
CPEB3Q8NE35 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.96■□□□□ 0.15
CPEB3Q8NE35 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.96■□□□□ 0.15
CPEB3Q8NE35 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPEB3Q8NE35 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CPEB3Q8NE35 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPEB3Q8NE35 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
CPEB3Q8NE35 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
CPEB3Q8NE35 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CPEB3Q8NE35 AC093677.2-201ENST00000600169 1863 ntBASIC15.96■□□□□ 0.15
CPEB3Q8NE35 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms