Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC33Q8N5R6 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC33Q8N5R6 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC33Q8N5R6 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC33Q8N5R6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CCDC33Q8N5R6 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC33Q8N5R6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC33Q8N5R6 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC33Q8N5R6 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC33Q8N5R6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC33Q8N5R6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.15■□□□□ 0.66
CCDC33Q8N5R6 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CCDC33Q8N5R6 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC33Q8N5R6 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC33Q8N5R6 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
CCDC33Q8N5R6 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC33Q8N5R6 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC33Q8N5R6 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC33Q8N5R6 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC33Q8N5R6 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC33Q8N5R6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC33Q8N5R6 AC026396.1-201ENST00000419388 421 ntBASIC19.15■□□□□ 0.66
CCDC33Q8N5R6 AL645929.1-201ENST00000420084 975 ntBASIC19.15■□□□□ 0.66
CCDC33Q8N5R6 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC33Q8N5R6 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC33Q8N5R6 AC034232.1-201ENST00000506026 1064 ntBASIC19.15■□□□□ 0.66
CCDC33Q8N5R6 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC33Q8N5R6 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CCDC33Q8N5R6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC33Q8N5R6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC33Q8N5R6 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC33Q8N5R6 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC33Q8N5R6 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
CCDC33Q8N5R6 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC33Q8N5R6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC33Q8N5R6 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC33Q8N5R6 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC33Q8N5R6 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC33Q8N5R6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
CCDC33Q8N5R6 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CCDC33Q8N5R6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC33Q8N5R6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CCDC33Q8N5R6 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC33Q8N5R6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.14■□□□□ 0.65
CCDC33Q8N5R6 ATP5G2P1-201ENST00000433580 426 ntBASIC19.14■□□□□ 0.65
CCDC33Q8N5R6 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC33Q8N5R6 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
CCDC33Q8N5R6 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.14■□□□□ 0.65
CCDC33Q8N5R6 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
CCDC33Q8N5R6 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC33Q8N5R6 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
CCDC33Q8N5R6 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC33Q8N5R6 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC33Q8N5R6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC33Q8N5R6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC33Q8N5R6 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC33Q8N5R6 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CCDC33Q8N5R6 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC33Q8N5R6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CCDC33Q8N5R6 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC33Q8N5R6 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC33Q8N5R6 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC33Q8N5R6 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC33Q8N5R6 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC33Q8N5R6 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC33Q8N5R6 MIR564-202ENST00000385049 94 ntBASIC19.13■□□□□ 0.65
CCDC33Q8N5R6 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC33Q8N5R6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC33Q8N5R6 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.13■□□□□ 0.65
CCDC33Q8N5R6 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.13■□□□□ 0.65
CCDC33Q8N5R6 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC33Q8N5R6 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC33Q8N5R6 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC33Q8N5R6 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC33Q8N5R6 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC33Q8N5R6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC33Q8N5R6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC33Q8N5R6 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CCDC33Q8N5R6 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC33Q8N5R6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC33Q8N5R6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
CCDC33Q8N5R6 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC33Q8N5R6 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC33Q8N5R6 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC33Q8N5R6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC33Q8N5R6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC33Q8N5R6 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC33Q8N5R6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC33Q8N5R6 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC33Q8N5R6 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CCDC33Q8N5R6 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CCDC33Q8N5R6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC33Q8N5R6 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
CCDC33Q8N5R6 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC33Q8N5R6 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC33Q8N5R6 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CCDC33Q8N5R6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC33Q8N5R6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC33Q8N5R6 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC33Q8N5R6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms