Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
XRN1Q8IZH2 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
XRN1Q8IZH2 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC25.2■■□□□ 1.62
XRN1Q8IZH2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC25.2■■□□□ 1.62
XRN1Q8IZH2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
XRN1Q8IZH2 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC25.2■■□□□ 1.62
XRN1Q8IZH2 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
XRN1Q8IZH2 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC25.2■■□□□ 1.62
XRN1Q8IZH2 HTR5BP-201ENST00000430851 1154 ntBASIC25.2■■□□□ 1.62
XRN1Q8IZH2 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
XRN1Q8IZH2 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC25.2■■□□□ 1.62
XRN1Q8IZH2 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
XRN1Q8IZH2 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
XRN1Q8IZH2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC25.2■■□□□ 1.62
XRN1Q8IZH2 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
XRN1Q8IZH2 PGM5P2-202ENST00000637225 1043 ntBASIC25.2■■□□□ 1.62
XRN1Q8IZH2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
XRN1Q8IZH2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
XRN1Q8IZH2 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC25.2■■□□□ 1.62
XRN1Q8IZH2 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
XRN1Q8IZH2 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC25.19■■□□□ 1.62
XRN1Q8IZH2 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
XRN1Q8IZH2 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
XRN1Q8IZH2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC25.19■■□□□ 1.62
XRN1Q8IZH2 AL032819.2-201ENST00000624543 2162 ntBASIC25.19■■□□□ 1.62
XRN1Q8IZH2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC25.19■■□□□ 1.62
XRN1Q8IZH2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC25.19■■□□□ 1.62
XRN1Q8IZH2 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
XRN1Q8IZH2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
XRN1Q8IZH2 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC25.19■■□□□ 1.62
XRN1Q8IZH2 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC25.19■■□□□ 1.62
XRN1Q8IZH2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC25.19■■□□□ 1.62
XRN1Q8IZH2 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC25.19■■□□□ 1.62
XRN1Q8IZH2 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC25.19■■□□□ 1.62
XRN1Q8IZH2 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC25.19■■□□□ 1.62
XRN1Q8IZH2 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC25.19■■□□□ 1.62
XRN1Q8IZH2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
XRN1Q8IZH2 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC25.19■■□□□ 1.62
XRN1Q8IZH2 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
XRN1Q8IZH2 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC25.18■■□□□ 1.62
XRN1Q8IZH2 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
XRN1Q8IZH2 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
XRN1Q8IZH2 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC25.18■■□□□ 1.62
XRN1Q8IZH2 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC25.18■■□□□ 1.62
XRN1Q8IZH2 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
XRN1Q8IZH2 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC25.18■■□□□ 1.62
XRN1Q8IZH2 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
XRN1Q8IZH2 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC25.18■■□□□ 1.62
XRN1Q8IZH2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC25.18■■□□□ 1.62
XRN1Q8IZH2 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC25.17■■□□□ 1.62
XRN1Q8IZH2 SPDYE21P-201ENST00000413323 827 ntBASIC25.17■■□□□ 1.62
XRN1Q8IZH2 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC25.17■■□□□ 1.62
XRN1Q8IZH2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC25.17■■□□□ 1.62
XRN1Q8IZH2 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC25.17■■□□□ 1.62
XRN1Q8IZH2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC25.17■■□□□ 1.62
XRN1Q8IZH2 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC25.17■■□□□ 1.62
XRN1Q8IZH2 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC25.17■■□□□ 1.62
XRN1Q8IZH2 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC25.17■■□□□ 1.62
XRN1Q8IZH2 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC25.17■■□□□ 1.62
XRN1Q8IZH2 MIR3197-201ENST00000582241 73 ntBASIC25.17■■□□□ 1.62
XRN1Q8IZH2 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC25.17■■□□□ 1.62
XRN1Q8IZH2 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC25.17■■□□□ 1.62
XRN1Q8IZH2 AL499627.1-201ENST00000569373 2188 ntBASIC25.17■■□□□ 1.62
XRN1Q8IZH2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC25.17■■□□□ 1.62
XRN1Q8IZH2 AC132938.6-201ENST00000623828 1655 ntBASIC25.17■■□□□ 1.62
XRN1Q8IZH2 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC25.17■■□□□ 1.62
XRN1Q8IZH2 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC25.17■■□□□ 1.62
XRN1Q8IZH2 AL049812.1-201ENST00000432563 2267 ntBASIC25.17■■□□□ 1.62
XRN1Q8IZH2 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC25.17■■□□□ 1.62
XRN1Q8IZH2 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
XRN1Q8IZH2 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC25.17■■□□□ 1.62
XRN1Q8IZH2 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC25.17■■□□□ 1.62
XRN1Q8IZH2 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC25.17■■□□□ 1.62
XRN1Q8IZH2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC25.17■■□□□ 1.62
XRN1Q8IZH2 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC25.17■■□□□ 1.62
XRN1Q8IZH2 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
XRN1Q8IZH2 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
XRN1Q8IZH2 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
XRN1Q8IZH2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
XRN1Q8IZH2 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
XRN1Q8IZH2 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
XRN1Q8IZH2 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC25.16■■□□□ 1.62
XRN1Q8IZH2 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
XRN1Q8IZH2 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
XRN1Q8IZH2 ATP6V0CP3-201ENST00000417255 467 ntBASIC25.16■■□□□ 1.62
XRN1Q8IZH2 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC25.16■■□□□ 1.62
XRN1Q8IZH2 AC096633.1-201ENST00000422446 749 ntBASIC25.16■■□□□ 1.62
XRN1Q8IZH2 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
XRN1Q8IZH2 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC25.16■■□□□ 1.62
XRN1Q8IZH2 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC25.16■■□□□ 1.62
XRN1Q8IZH2 AL596442.2-201ENST00000610240 980 ntBASIC25.16■■□□□ 1.62
XRN1Q8IZH2 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC25.16■■□□□ 1.62
XRN1Q8IZH2 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
XRN1Q8IZH2 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
XRN1Q8IZH2 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
XRN1Q8IZH2 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
XRN1Q8IZH2 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC25.15■■□□□ 1.62
XRN1Q8IZH2 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
XRN1Q8IZH2 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
XRN1Q8IZH2 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC25.15■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms