Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHPFQ8IZ52 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHPFQ8IZ52 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHPFQ8IZ52 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHPFQ8IZ52 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CHPFQ8IZ52 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHPFQ8IZ52 NSUN5P1-202ENST00000421140 1535 ntBASIC18.56■□□□□ 0.56
CHPFQ8IZ52 NSUN5P2-203ENST00000457352 1529 ntBASIC18.56■□□□□ 0.56
CHPFQ8IZ52 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHPFQ8IZ52 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHPFQ8IZ52 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CHPFQ8IZ52 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHPFQ8IZ52 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHPFQ8IZ52 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.56■□□□□ 0.56
CHPFQ8IZ52 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHPFQ8IZ52 MIR149-201ENST00000384879 89 ntBASIC18.56■□□□□ 0.56
CHPFQ8IZ52 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.56■□□□□ 0.56
CHPFQ8IZ52 MINOS1P3-201ENST00000457048 203 ntBASIC18.56■□□□□ 0.56
CHPFQ8IZ52 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CHPFQ8IZ52 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHPFQ8IZ52 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.56■□□□□ 0.56
CHPFQ8IZ52 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.56■□□□□ 0.56
CHPFQ8IZ52 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.56■□□□□ 0.56
CHPFQ8IZ52 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.56■□□□□ 0.56
CHPFQ8IZ52 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHPFQ8IZ52 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHPFQ8IZ52 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHPFQ8IZ52 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.56■□□□□ 0.56
CHPFQ8IZ52 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CHPFQ8IZ52 AC093503.3-201ENST00000624917 2352 ntBASIC18.56■□□□□ 0.56
CHPFQ8IZ52 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHPFQ8IZ52 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHPFQ8IZ52 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHPFQ8IZ52 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
CHPFQ8IZ52 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHPFQ8IZ52 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHPFQ8IZ52 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHPFQ8IZ52 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHPFQ8IZ52 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHPFQ8IZ52 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHPFQ8IZ52 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHPFQ8IZ52 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHPFQ8IZ52 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.55■□□□□ 0.56
CHPFQ8IZ52 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CHPFQ8IZ52 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHPFQ8IZ52 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CHPFQ8IZ52 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.55■□□□□ 0.56
CHPFQ8IZ52 AC009102.3-201ENST00000623118 1491 ntBASIC18.55■□□□□ 0.56
CHPFQ8IZ52 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
CHPFQ8IZ52 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CHPFQ8IZ52 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHPFQ8IZ52 AC079781.3-201ENST00000449110 356 ntBASIC18.55■□□□□ 0.56
CHPFQ8IZ52 AC009078.2-202ENST00000463353 338 ntBASIC18.55■□□□□ 0.56
CHPFQ8IZ52 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.55■□□□□ 0.56
CHPFQ8IZ52 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHPFQ8IZ52 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.55■□□□□ 0.56
CHPFQ8IZ52 AL160237.2-201ENST00000556165 472 ntBASIC18.55■□□□□ 0.56
CHPFQ8IZ52 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.55■□□□□ 0.56
CHPFQ8IZ52 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.55■□□□□ 0.56
CHPFQ8IZ52 AC008687.5-201ENST00000593746 558 ntBASIC18.55■□□□□ 0.56
CHPFQ8IZ52 AL353801.3-201ENST00000609898 542 ntBASIC18.55■□□□□ 0.56
CHPFQ8IZ52 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHPFQ8IZ52 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CHPFQ8IZ52 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHPFQ8IZ52 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHPFQ8IZ52 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
CHPFQ8IZ52 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHPFQ8IZ52 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHPFQ8IZ52 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHPFQ8IZ52 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.55■□□□□ 0.56
CHPFQ8IZ52 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CHPFQ8IZ52 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.54■□□□□ 0.56
CHPFQ8IZ52 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHPFQ8IZ52 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHPFQ8IZ52 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.54■□□□□ 0.56
CHPFQ8IZ52 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
CHPFQ8IZ52 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CHPFQ8IZ52 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHPFQ8IZ52 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHPFQ8IZ52 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHPFQ8IZ52 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.54■□□□□ 0.56
CHPFQ8IZ52 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHPFQ8IZ52 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHPFQ8IZ52 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHPFQ8IZ52 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHPFQ8IZ52 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHPFQ8IZ52 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHPFQ8IZ52 NUS1P2-201ENST00000417358 873 ntBASIC18.54■□□□□ 0.56
CHPFQ8IZ52 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.54■□□□□ 0.56
CHPFQ8IZ52 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.54■□□□□ 0.56
CHPFQ8IZ52 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHPFQ8IZ52 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHPFQ8IZ52 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.54■□□□□ 0.56
CHPFQ8IZ52 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.54■□□□□ 0.56
CHPFQ8IZ52 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHPFQ8IZ52 AP005901.3-202ENST00000581653 237 ntBASIC18.54■□□□□ 0.56
CHPFQ8IZ52 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHPFQ8IZ52 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.54■□□□□ 0.56
CHPFQ8IZ52 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHPFQ8IZ52 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms