Protein–RNA interactions for Protein: Q8IYG6

LRRC56, Leucine-rich repeat-containing protein 56, humanhuman

Predicted RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56Q8IYG6 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC56Q8IYG6 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
LRRC56Q8IYG6 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC56Q8IYG6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC56Q8IYG6 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC56Q8IYG6 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.59■□□□□ 0.41
LRRC56Q8IYG6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC56Q8IYG6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
LRRC56Q8IYG6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC56Q8IYG6 LINC00167-201ENST00000530583 1419 ntBASIC17.59■□□□□ 0.41
LRRC56Q8IYG6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.59■□□□□ 0.41
LRRC56Q8IYG6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC56Q8IYG6 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.59■□□□□ 0.41
LRRC56Q8IYG6 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC56Q8IYG6 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC56Q8IYG6 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.59■□□□□ 0.41
LRRC56Q8IYG6 NTF6B-201ENST00000591913 560 ntBASIC17.59■□□□□ 0.41
LRRC56Q8IYG6 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
LRRC56Q8IYG6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.59■□□□□ 0.41
LRRC56Q8IYG6 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.59■□□□□ 0.41
LRRC56Q8IYG6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC56Q8IYG6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC56Q8IYG6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
LRRC56Q8IYG6 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC56Q8IYG6 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.59■□□□□ 0.41
LRRC56Q8IYG6 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC56Q8IYG6 REXO1L9P-201ENST00000604264 2108 ntBASIC17.59■□□□□ 0.41
LRRC56Q8IYG6 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRC56Q8IYG6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRC56Q8IYG6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.58■□□□□ 0.41
LRRC56Q8IYG6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRC56Q8IYG6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.58■□□□□ 0.41
LRRC56Q8IYG6 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
LRRC56Q8IYG6 AC132938.6-201ENST00000623828 1655 ntBASIC17.58■□□□□ 0.41
LRRC56Q8IYG6 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRC56Q8IYG6 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRC56Q8IYG6 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.58■□□□□ 0.41
LRRC56Q8IYG6 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC56Q8IYG6 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC56Q8IYG6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.58■□□□□ 0.4
LRRC56Q8IYG6 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC56Q8IYG6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC56Q8IYG6 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC56Q8IYG6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.58■□□□□ 0.4
LRRC56Q8IYG6 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.58■□□□□ 0.4
LRRC56Q8IYG6 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.58■□□□□ 0.4
LRRC56Q8IYG6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC56Q8IYG6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.58■□□□□ 0.4
LRRC56Q8IYG6 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.58■□□□□ 0.4
LRRC56Q8IYG6 ZNF444P1-201ENST00000559497 298 ntBASIC17.58■□□□□ 0.4
LRRC56Q8IYG6 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.58■□□□□ 0.4
LRRC56Q8IYG6 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.58■□□□□ 0.4
LRRC56Q8IYG6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC56Q8IYG6 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.4
LRRC56Q8IYG6 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.58■□□□□ 0.4
LRRC56Q8IYG6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC56Q8IYG6 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
LRRC56Q8IYG6 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
LRRC56Q8IYG6 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC56Q8IYG6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC56Q8IYG6 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC56Q8IYG6 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC56Q8IYG6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC56Q8IYG6 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC56Q8IYG6 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC56Q8IYG6 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
LRRC56Q8IYG6 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC56Q8IYG6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC56Q8IYG6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC56Q8IYG6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.57■□□□□ 0.4
LRRC56Q8IYG6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC56Q8IYG6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC56Q8IYG6 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC56Q8IYG6 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC56Q8IYG6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC56Q8IYG6 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LRRC56Q8IYG6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC56Q8IYG6 KRT18P48-201ENST00000434763 852 ntBASIC17.57■□□□□ 0.4
LRRC56Q8IYG6 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC56Q8IYG6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC56Q8IYG6 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.57■□□□□ 0.4
LRRC56Q8IYG6 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.57■□□□□ 0.4
LRRC56Q8IYG6 AC008687.5-201ENST00000593746 558 ntBASIC17.57■□□□□ 0.4
LRRC56Q8IYG6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.57■□□□□ 0.4
LRRC56Q8IYG6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.57■□□□□ 0.4
LRRC56Q8IYG6 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.57■□□□□ 0.4
LRRC56Q8IYG6 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.57■□□□□ 0.4
LRRC56Q8IYG6 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
LRRC56Q8IYG6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC56Q8IYG6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.57■□□□□ 0.4
LRRC56Q8IYG6 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC56Q8IYG6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC56Q8IYG6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.57■□□□□ 0.4
LRRC56Q8IYG6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC56Q8IYG6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC56Q8IYG6 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC56Q8IYG6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC56Q8IYG6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC56Q8IYG6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
LRRC56Q8IYG6 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms