Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 AC112777.1-201ENST00000540175 1423 ntBASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 AL096828.2-201ENST00000567259 1965 ntBASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 PKD1P1-201ENST00000458669 6805 ntBASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 AL512625.2-201ENST00000417533 625 ntBASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 PCDHB17P-201ENST00000539533 2393 ntBASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD2Q8IV50 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 ZNRF2P3-201ENST00000424200 374 ntBASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 AC093787.1-201ENST00000450396 207 ntBASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LYSMD2Q8IV50 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LYSMD2Q8IV50 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LYSMD2Q8IV50 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.02■□□□□ 0.16
LYSMD2Q8IV50 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.02■□□□□ 0.16
LYSMD2Q8IV50 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.02■□□□□ 0.16
LYSMD2Q8IV50 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.02■□□□□ 0.16
LYSMD2Q8IV50 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LYSMD2Q8IV50 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LYSMD2Q8IV50 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
LYSMD2Q8IV50 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
LYSMD2Q8IV50 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LYSMD2Q8IV50 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LYSMD2Q8IV50 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
LYSMD2Q8IV50 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LYSMD2Q8IV50 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.02■□□□□ 0.16
LYSMD2Q8IV50 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LYSMD2Q8IV50 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
LYSMD2Q8IV50 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.02■□□□□ 0.16
LYSMD2Q8IV50 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC16.02■□□□□ 0.16
LYSMD2Q8IV50 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.02■□□□□ 0.16
LYSMD2Q8IV50 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LYSMD2Q8IV50 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms