Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 AC068587.9-201ENST00000641814 219 ntBASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
VPS13BQ7Z7G8 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
VPS13BQ7Z7G8 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
VPS13BQ7Z7G8 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC11.21□□□□□ -0.61
VPS13BQ7Z7G8 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
VPS13BQ7Z7G8 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC11.21□□□□□ -0.61
VPS13BQ7Z7G8 AL645939.2-201ENST00000427340 991 ntBASIC11.21□□□□□ -0.61
VPS13BQ7Z7G8 THAP5-204ENST00000438865 868 ntTSL 2 BASIC11.21□□□□□ -0.61
VPS13BQ7Z7G8 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC11.21□□□□□ -0.61
VPS13BQ7Z7G8 AC083906.6-201ENST00000641366 219 ntBASIC11.21□□□□□ -0.61
VPS13BQ7Z7G8 AC079781.4-201ENST00000641908 219 ntBASIC11.21□□□□□ -0.61
VPS13BQ7Z7G8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
VPS13BQ7Z7G8 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC11.21□□□□□ -0.61
VPS13BQ7Z7G8 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
VPS13BQ7Z7G8 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
VPS13BQ7Z7G8 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
VPS13BQ7Z7G8 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
VPS13BQ7Z7G8 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
VPS13BQ7Z7G8 WDR53-203ENST00000429115 683 ntTSL 2 BASIC11.21□□□□□ -0.61
VPS13BQ7Z7G8 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC11.21□□□□□ -0.61
VPS13BQ7Z7G8 COX5A-204ENST00000567270 579 ntTSL 3 BASIC11.21□□□□□ -0.61
VPS13BQ7Z7G8 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
VPS13BQ7Z7G8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC11.21□□□□□ -0.61
VPS13BQ7Z7G8 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
VPS13BQ7Z7G8 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
VPS13BQ7Z7G8 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC11.21□□□□□ -0.62
VPS13BQ7Z7G8 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
VPS13BQ7Z7G8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
VPS13BQ7Z7G8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC11.21□□□□□ -0.62
VPS13BQ7Z7G8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
VPS13BQ7Z7G8 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
VPS13BQ7Z7G8 AL139400.1-201ENST00000366220 510 ntBASIC11.21□□□□□ -0.62
VPS13BQ7Z7G8 INIP-202ENST00000374236 874 ntTSL 2 BASIC11.21□□□□□ -0.62
VPS13BQ7Z7G8 MIR4469-201ENST00000583919 79 ntBASIC11.21□□□□□ -0.62
VPS13BQ7Z7G8 AC011467.2-201ENST00000598425 242 ntBASIC11.21□□□□□ -0.62
VPS13BQ7Z7G8 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC11.21□□□□□ -0.62
VPS13BQ7Z7G8 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC11.21□□□□□ -0.62
VPS13BQ7Z7G8 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
VPS13BQ7Z7G8 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 BEX3-201ENST00000361298 921 ntTSL 2 BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 DANCR-204ENST00000444958 709 ntTSL 3 BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 MCCD1P2-201ENST00000423228 335 ntBASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 MIR1199-201ENST00000621445 119 ntBASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 RPL28-205ENST00000558131 444 ntTSL 5 BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 GREM1-201ENST00000560677 623 ntTSL 4 BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 AL356309.3-201ENST00000624132 1934 ntBASIC11.2□□□□□ -0.62
VPS13BQ7Z7G8 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 CFL1-202ENST00000524553 860 ntTSL 2 BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 AC004817.3-201ENST00000602957 2129 ntBASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC11.19□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms