Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SHFQ7M4L6 FAM207BP-201ENST00000447172 505 ntBASIC16.52■□□□□ 0.24
SHFQ7M4L6 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.52■□□□□ 0.24
SHFQ7M4L6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.52■□□□□ 0.24
SHFQ7M4L6 RARRES2P10-201ENST00000564312 460 ntBASIC16.52■□□□□ 0.24
SHFQ7M4L6 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.52■□□□□ 0.24
SHFQ7M4L6 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SHFQ7M4L6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.52■□□□□ 0.24
SHFQ7M4L6 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SHFQ7M4L6 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SHFQ7M4L6 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.52■□□□□ 0.23
SHFQ7M4L6 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SHFQ7M4L6 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
SHFQ7M4L6 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SHFQ7M4L6 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SHFQ7M4L6 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SHFQ7M4L6 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SHFQ7M4L6 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
SHFQ7M4L6 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
SHFQ7M4L6 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHFQ7M4L6 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SHFQ7M4L6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.51■□□□□ 0.23
SHFQ7M4L6 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.51■□□□□ 0.23
SHFQ7M4L6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.51■□□□□ 0.23
SHFQ7M4L6 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHFQ7M4L6 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.51■□□□□ 0.23
SHFQ7M4L6 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHFQ7M4L6 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHFQ7M4L6 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHFQ7M4L6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHFQ7M4L6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHFQ7M4L6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SHFQ7M4L6 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHFQ7M4L6 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SHFQ7M4L6 SLC25A6P5-201ENST00000435663 894 ntBASIC16.51■□□□□ 0.23
SHFQ7M4L6 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SHFQ7M4L6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.51■□□□□ 0.23
SHFQ7M4L6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SHFQ7M4L6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.51■□□□□ 0.23
SHFQ7M4L6 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.51■□□□□ 0.23
SHFQ7M4L6 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SHFQ7M4L6 AC130371.2-201ENST00000619443 611 ntBASIC16.51■□□□□ 0.23
SHFQ7M4L6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SHFQ7M4L6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHFQ7M4L6 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.51■□□□□ 0.23
SHFQ7M4L6 PP12613-201ENST00000424958 2230 ntBASIC16.51■□□□□ 0.23
SHFQ7M4L6 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
SHFQ7M4L6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
SHFQ7M4L6 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHFQ7M4L6 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHFQ7M4L6 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHFQ7M4L6 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SHFQ7M4L6 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.5■□□□□ 0.23
SHFQ7M4L6 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.5■□□□□ 0.23
SHFQ7M4L6 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHFQ7M4L6 FLJ13224-201ENST00000313737 1514 ntBASIC16.5■□□□□ 0.23
SHFQ7M4L6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHFQ7M4L6 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHFQ7M4L6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHFQ7M4L6 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SHFQ7M4L6 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHFQ7M4L6 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHFQ7M4L6 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SHFQ7M4L6 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SHFQ7M4L6 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SHFQ7M4L6 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHFQ7M4L6 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.5■□□□□ 0.23
SHFQ7M4L6 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.5■□□□□ 0.23
SHFQ7M4L6 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SHFQ7M4L6 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHFQ7M4L6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHFQ7M4L6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHFQ7M4L6 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHFQ7M4L6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.5■□□□□ 0.23
SHFQ7M4L6 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.5■□□□□ 0.23
SHFQ7M4L6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.5■□□□□ 0.23
SHFQ7M4L6 AF186192.3-201ENST00000583427 947 ntBASIC16.5■□□□□ 0.23
SHFQ7M4L6 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SHFQ7M4L6 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHFQ7M4L6 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SHFQ7M4L6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHFQ7M4L6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHFQ7M4L6 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SHFQ7M4L6 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHFQ7M4L6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
SHFQ7M4L6 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SHFQ7M4L6 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SHFQ7M4L6 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHFQ7M4L6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHFQ7M4L6 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SHFQ7M4L6 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
SHFQ7M4L6 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.5■□□□□ 0.23
SHFQ7M4L6 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.5■□□□□ 0.23
SHFQ7M4L6 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SHFQ7M4L6 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHFQ7M4L6 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHFQ7M4L6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHFQ7M4L6 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHFQ7M4L6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHFQ7M4L6 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms