Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQA1Q5Y7H0 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQA1Q5Y7H0 AC005082.1-201ENST00000413042 2259 ntBASIC17.02■□□□□ 0.32
HLA-DQA1Q5Y7H0 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
HLA-DQA1Q5Y7H0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
HLA-DQA1Q5Y7H0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQA1Q5Y7H0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.02■□□□□ 0.32
HLA-DQA1Q5Y7H0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.02■□□□□ 0.32
HLA-DQA1Q5Y7H0 KRT18P38-201ENST00000449496 1282 ntBASIC17.02■□□□□ 0.32
HLA-DQA1Q5Y7H0 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.02■□□□□ 0.32
HLA-DQA1Q5Y7H0 AL671277.2-201ENST00000458060 996 ntBASIC17.02■□□□□ 0.32
HLA-DQA1Q5Y7H0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.02■□□□□ 0.32
HLA-DQA1Q5Y7H0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.02■□□□□ 0.32
HLA-DQA1Q5Y7H0 AC008687.5-201ENST00000593746 558 ntBASIC17.02■□□□□ 0.32
HLA-DQA1Q5Y7H0 AL136038.4-201ENST00000603606 1261 ntBASIC17.02■□□□□ 0.32
HLA-DQA1Q5Y7H0 AC010331.1-201ENST00000611423 582 ntBASIC17.02■□□□□ 0.32
HLA-DQA1Q5Y7H0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.02■□□□□ 0.32
HLA-DQA1Q5Y7H0 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.02■□□□□ 0.32
HLA-DQA1Q5Y7H0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.02■□□□□ 0.32
HLA-DQA1Q5Y7H0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.02■□□□□ 0.32
HLA-DQA1Q5Y7H0 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQA1Q5Y7H0 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.31
HLA-DQA1Q5Y7H0 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
HLA-DQA1Q5Y7H0 LINC01311-201ENST00000565162 1445 ntBASIC17.02■□□□□ 0.31
HLA-DQA1Q5Y7H0 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DQA1Q5Y7H0 AC099343.3-201ENST00000605834 2503 ntBASIC17.02■□□□□ 0.31
HLA-DQA1Q5Y7H0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
HLA-DQA1Q5Y7H0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.02■□□□□ 0.31
HLA-DQA1Q5Y7H0 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DQA1Q5Y7H0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
HLA-DQA1Q5Y7H0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DQA1Q5Y7H0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQA1Q5Y7H0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQA1Q5Y7H0 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQA1Q5Y7H0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQA1Q5Y7H0 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQA1Q5Y7H0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQA1Q5Y7H0 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQA1Q5Y7H0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DQA1Q5Y7H0 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQA1Q5Y7H0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQA1Q5Y7H0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQA1Q5Y7H0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQA1Q5Y7H0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQA1Q5Y7H0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DQA1Q5Y7H0 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQA1Q5Y7H0 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQA1Q5Y7H0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQA1Q5Y7H0 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DQA1Q5Y7H0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DQA1Q5Y7H0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.01■□□□□ 0.31
HLA-DQA1Q5Y7H0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.01■□□□□ 0.31
HLA-DQA1Q5Y7H0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
HLA-DQA1Q5Y7H0 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DQA1Q5Y7H0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.01■□□□□ 0.31
HLA-DQA1Q5Y7H0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DQA1Q5Y7H0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQA1Q5Y7H0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.01■□□□□ 0.31
HLA-DQA1Q5Y7H0 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.01■□□□□ 0.31
HLA-DQA1Q5Y7H0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQA1Q5Y7H0 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DQA1Q5Y7H0 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
HLA-DQA1Q5Y7H0 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQA1Q5Y7H0 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
HLA-DQA1Q5Y7H0 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DQA1Q5Y7H0 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQA1Q5Y7H0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQA1Q5Y7H0 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQA1Q5Y7H0 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17■□□□□ 0.31
HLA-DQA1Q5Y7H0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQA1Q5Y7H0 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQA1Q5Y7H0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQA1Q5Y7H0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQA1Q5Y7H0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQA1Q5Y7H0 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
HLA-DQA1Q5Y7H0 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQA1Q5Y7H0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQA1Q5Y7H0 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQA1Q5Y7H0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17■□□□□ 0.31
HLA-DQA1Q5Y7H0 GMCL1P1-201ENST00000463439 1581 ntBASIC17■□□□□ 0.31
HLA-DQA1Q5Y7H0 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQA1Q5Y7H0 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17■□□□□ 0.31
HLA-DQA1Q5Y7H0 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17■□□□□ 0.31
HLA-DQA1Q5Y7H0 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17■□□□□ 0.31
HLA-DQA1Q5Y7H0 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17■□□□□ 0.31
HLA-DQA1Q5Y7H0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17■□□□□ 0.31
HLA-DQA1Q5Y7H0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
HLA-DQA1Q5Y7H0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17■□□□□ 0.31
HLA-DQA1Q5Y7H0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
HLA-DQA1Q5Y7H0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQA1Q5Y7H0 OR6D1P-203ENST00000641209 4860 ntBASIC17■□□□□ 0.31
HLA-DQA1Q5Y7H0 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQA1Q5Y7H0 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HLA-DQA1Q5Y7H0 AL391807.1-203ENST00000604392 2365 ntBASIC17■□□□□ 0.31
HLA-DQA1Q5Y7H0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQA1Q5Y7H0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DQA1Q5Y7H0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.99■□□□□ 0.31
HLA-DQA1Q5Y7H0 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.99■□□□□ 0.31
HLA-DQA1Q5Y7H0 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DQA1Q5Y7H0 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms