Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TTC39BQ5VTQ0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TTC39BQ5VTQ0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.03■□□□□ 0.64
TTC39BQ5VTQ0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
TTC39BQ5VTQ0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TTC39BQ5VTQ0 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TTC39BQ5VTQ0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TTC39BQ5VTQ0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TTC39BQ5VTQ0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TTC39BQ5VTQ0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TTC39BQ5VTQ0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TTC39BQ5VTQ0 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TTC39BQ5VTQ0 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.02■□□□□ 0.64
TTC39BQ5VTQ0 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TTC39BQ5VTQ0 AC090340.1-201ENST00000620778 4980 ntBASIC19.02■□□□□ 0.64
TTC39BQ5VTQ0 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TTC39BQ5VTQ0 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
TTC39BQ5VTQ0 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TTC39BQ5VTQ0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TTC39BQ5VTQ0 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TTC39BQ5VTQ0 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.02■□□□□ 0.64
TTC39BQ5VTQ0 ZNF444P1-201ENST00000559497 298 ntBASIC19.02■□□□□ 0.64
TTC39BQ5VTQ0 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.02■□□□□ 0.64
TTC39BQ5VTQ0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.02■□□□□ 0.64
TTC39BQ5VTQ0 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TTC39BQ5VTQ0 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
TTC39BQ5VTQ0 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TTC39BQ5VTQ0 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
TTC39BQ5VTQ0 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TTC39BQ5VTQ0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TTC39BQ5VTQ0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.02■□□□□ 0.63
TTC39BQ5VTQ0 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TTC39BQ5VTQ0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TTC39BQ5VTQ0 AC073592.3-201ENST00000625118 1834 ntBASIC19.02■□□□□ 0.63
TTC39BQ5VTQ0 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 HBZP1-201ENST00000354915 429 ntBASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 PVRIG2P-201ENST00000435460 978 ntBASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 AC083849.1-201ENST00000615227 514 ntBASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 ABALON-201ENST00000629058 1903 ntBASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
TTC39BQ5VTQ0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19■□□□□ 0.63
TTC39BQ5VTQ0 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19■□□□□ 0.63
TTC39BQ5VTQ0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TTC39BQ5VTQ0 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19■□□□□ 0.63
TTC39BQ5VTQ0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19■□□□□ 0.63
TTC39BQ5VTQ0 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19■□□□□ 0.63
TTC39BQ5VTQ0 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TTC39BQ5VTQ0 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TTC39BQ5VTQ0 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19■□□□□ 0.63
TTC39BQ5VTQ0 AL136038.3-201ENST00000561909 1096 ntBASIC19■□□□□ 0.63
TTC39BQ5VTQ0 AL136038.4-201ENST00000603606 1261 ntBASIC19■□□□□ 0.63
TTC39BQ5VTQ0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19■□□□□ 0.63
TTC39BQ5VTQ0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19■□□□□ 0.63
TTC39BQ5VTQ0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19■□□□□ 0.63
TTC39BQ5VTQ0 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19■□□□□ 0.63
TTC39BQ5VTQ0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TTC39BQ5VTQ0 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TTC39BQ5VTQ0 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19■□□□□ 0.63
TTC39BQ5VTQ0 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TTC39BQ5VTQ0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TTC39BQ5VTQ0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TTC39BQ5VTQ0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TTC39BQ5VTQ0 AL163051.1-201ENST00000569214 1512 ntBASIC19■□□□□ 0.63
TTC39BQ5VTQ0 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms