Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCSMST1Q4G0I0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCSMST1Q4G0I0 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCSMST1Q4G0I0 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCSMST1Q4G0I0 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCSMST1Q4G0I0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCSMST1Q4G0I0 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCSMST1Q4G0I0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCSMST1Q4G0I0 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.72■□□□□ 0.43
CCSMST1Q4G0I0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCSMST1Q4G0I0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.72■□□□□ 0.43
CCSMST1Q4G0I0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCSMST1Q4G0I0 MIR1224-201ENST00000408193 85 ntBASIC17.72■□□□□ 0.43
CCSMST1Q4G0I0 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.72■□□□□ 0.43
CCSMST1Q4G0I0 KRT18P35-201ENST00000510488 1269 ntBASIC17.72■□□□□ 0.43
CCSMST1Q4G0I0 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.72■□□□□ 0.43
CCSMST1Q4G0I0 LINC01238-205ENST00000567549 1107 ntBASIC17.72■□□□□ 0.43
CCSMST1Q4G0I0 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCSMST1Q4G0I0 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCSMST1Q4G0I0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.72■□□□□ 0.43
CCSMST1Q4G0I0 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CCSMST1Q4G0I0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.72■□□□□ 0.43
CCSMST1Q4G0I0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCSMST1Q4G0I0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCSMST1Q4G0I0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.72■□□□□ 0.43
CCSMST1Q4G0I0 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCSMST1Q4G0I0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCSMST1Q4G0I0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCSMST1Q4G0I0 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.71■□□□□ 0.43
CCSMST1Q4G0I0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCSMST1Q4G0I0 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCSMST1Q4G0I0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCSMST1Q4G0I0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.71■□□□□ 0.43
CCSMST1Q4G0I0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCSMST1Q4G0I0 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCSMST1Q4G0I0 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCSMST1Q4G0I0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCSMST1Q4G0I0 AC018470.1-201ENST00000624790 3129 ntBASIC17.71■□□□□ 0.43
CCSMST1Q4G0I0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCSMST1Q4G0I0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCSMST1Q4G0I0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCSMST1Q4G0I0 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCSMST1Q4G0I0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCSMST1Q4G0I0 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CCSMST1Q4G0I0 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.71■□□□□ 0.43
CCSMST1Q4G0I0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.71■□□□□ 0.43
CCSMST1Q4G0I0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.71■□□□□ 0.43
CCSMST1Q4G0I0 ZNF444P1-201ENST00000559497 298 ntBASIC17.71■□□□□ 0.43
CCSMST1Q4G0I0 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.71■□□□□ 0.43
CCSMST1Q4G0I0 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.71■□□□□ 0.43
CCSMST1Q4G0I0 AC024563.2-201ENST00000603282 481 ntBASIC17.71■□□□□ 0.43
CCSMST1Q4G0I0 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.71■□□□□ 0.43
CCSMST1Q4G0I0 AL590326.2-201ENST00000625139 305 ntBASIC17.71■□□□□ 0.43
CCSMST1Q4G0I0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCSMST1Q4G0I0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CCSMST1Q4G0I0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCSMST1Q4G0I0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCSMST1Q4G0I0 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.71■□□□□ 0.43
CCSMST1Q4G0I0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCSMST1Q4G0I0 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCSMST1Q4G0I0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCSMST1Q4G0I0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CCSMST1Q4G0I0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.71■□□□□ 0.42
CCSMST1Q4G0I0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
CCSMST1Q4G0I0 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.71■□□□□ 0.42
CCSMST1Q4G0I0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CCSMST1Q4G0I0 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
CCSMST1Q4G0I0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCSMST1Q4G0I0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.7■□□□□ 0.42
CCSMST1Q4G0I0 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCSMST1Q4G0I0 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCSMST1Q4G0I0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CCSMST1Q4G0I0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCSMST1Q4G0I0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.7■□□□□ 0.42
CCSMST1Q4G0I0 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CCSMST1Q4G0I0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
CCSMST1Q4G0I0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCSMST1Q4G0I0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCSMST1Q4G0I0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCSMST1Q4G0I0 MIR662-201ENST00000384847 95 ntBASIC17.7■□□□□ 0.42
CCSMST1Q4G0I0 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCSMST1Q4G0I0 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.7■□□□□ 0.42
CCSMST1Q4G0I0 AL445228.2-201ENST00000605589 952 ntBASIC17.7■□□□□ 0.42
CCSMST1Q4G0I0 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCSMST1Q4G0I0 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCSMST1Q4G0I0 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCSMST1Q4G0I0 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCSMST1Q4G0I0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCSMST1Q4G0I0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCSMST1Q4G0I0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.7■□□□□ 0.42
CCSMST1Q4G0I0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CCSMST1Q4G0I0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCSMST1Q4G0I0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCSMST1Q4G0I0 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCSMST1Q4G0I0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCSMST1Q4G0I0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCSMST1Q4G0I0 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCSMST1Q4G0I0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
CCSMST1Q4G0I0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCSMST1Q4G0I0 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms