Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD47Q08722 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD47Q08722 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.97■□□□□ 0.31
CD47Q08722 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD47Q08722 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.97■□□□□ 0.31
CD47Q08722 KRT8P45-201ENST00000414328 1447 ntBASIC16.97■□□□□ 0.31
CD47Q08722 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.97■□□□□ 0.31
CD47Q08722 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD47Q08722 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CD47Q08722 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD47Q08722 NIFKP9-201ENST00000419265 221 ntBASIC16.97■□□□□ 0.31
CD47Q08722 AL353807.1-201ENST00000427475 662 ntBASIC16.97■□□□□ 0.31
CD47Q08722 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.97■□□□□ 0.31
CD47Q08722 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.97■□□□□ 0.31
CD47Q08722 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.97■□□□□ 0.31
CD47Q08722 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.97■□□□□ 0.31
CD47Q08722 AL445675.2-201ENST00000620291 557 ntBASIC16.97■□□□□ 0.31
CD47Q08722 ITM2C-210ENST00000620962 501 ntBASIC16.97■□□□□ 0.31
CD47Q08722 AC131212.4-201ENST00000623606 975 ntBASIC16.97■□□□□ 0.31
CD47Q08722 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD47Q08722 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD47Q08722 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD47Q08722 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.97■□□□□ 0.31
CD47Q08722 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD47Q08722 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD47Q08722 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD47Q08722 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD47Q08722 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD47Q08722 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.97■□□□□ 0.31
CD47Q08722 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD47Q08722 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD47Q08722 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.96■□□□□ 0.31
CD47Q08722 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD47Q08722 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD47Q08722 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
CD47Q08722 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD47Q08722 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.96■□□□□ 0.31
CD47Q08722 OR6D1P-202ENST00000641007 5290 ntBASIC16.96■□□□□ 0.31
CD47Q08722 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD47Q08722 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CD47Q08722 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD47Q08722 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
CD47Q08722 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CD47Q08722 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD47Q08722 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CD47Q08722 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD47Q08722 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CD47Q08722 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CD47Q08722 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD47Q08722 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CD47Q08722 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.96■□□□□ 0.31
CD47Q08722 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.96■□□□□ 0.31
CD47Q08722 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.96■□□□□ 0.31
CD47Q08722 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.96■□□□□ 0.31
CD47Q08722 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD47Q08722 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.96■□□□□ 0.31
CD47Q08722 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CD47Q08722 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.96■□□□□ 0.3
CD47Q08722 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CD47Q08722 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.96■□□□□ 0.3
CD47Q08722 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CD47Q08722 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CD47Q08722 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD47Q08722 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD47Q08722 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CD47Q08722 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CD47Q08722 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CD47Q08722 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.95■□□□□ 0.3
CD47Q08722 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD47Q08722 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.95■□□□□ 0.3
CD47Q08722 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CD47Q08722 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD47Q08722 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.95■□□□□ 0.3
CD47Q08722 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD47Q08722 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.95■□□□□ 0.3
CD47Q08722 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CD47Q08722 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD47Q08722 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.95■□□□□ 0.3
CD47Q08722 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CD47Q08722 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CD47Q08722 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.95■□□□□ 0.3
CD47Q08722 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.95■□□□□ 0.3
CD47Q08722 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.95■□□□□ 0.3
CD47Q08722 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.95■□□□□ 0.3
CD47Q08722 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD47Q08722 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.95■□□□□ 0.3
CD47Q08722 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.95■□□□□ 0.3
CD47Q08722 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD47Q08722 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD47Q08722 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.95■□□□□ 0.3
CD47Q08722 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CD47Q08722 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.95■□□□□ 0.3
CD47Q08722 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD47Q08722 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
CD47Q08722 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD47Q08722 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.94■□□□□ 0.3
CD47Q08722 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD47Q08722 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD47Q08722 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD47Q08722 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms