Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14□□□□□ -0.17
HIST1H1AQ02539 FAM197Y1-201ENST00000421178 764 ntBASIC14□□□□□ -0.17
HIST1H1AQ02539 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
HIST1H1AQ02539 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14□□□□□ -0.17
HIST1H1AQ02539 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC14□□□□□ -0.17
HIST1H1AQ02539 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14□□□□□ -0.17
HIST1H1AQ02539 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC14□□□□□ -0.17
HIST1H1AQ02539 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
HIST1H1AQ02539 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14□□□□□ -0.17
HIST1H1AQ02539 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC14□□□□□ -0.17
HIST1H1AQ02539 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC14□□□□□ -0.17
HIST1H1AQ02539 AC068587.9-201ENST00000641814 219 ntBASIC14□□□□□ -0.17
HIST1H1AQ02539 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14□□□□□ -0.17
HIST1H1AQ02539 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
HIST1H1AQ02539 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC14□□□□□ -0.17
HIST1H1AQ02539 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
HIST1H1AQ02539 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HIST1H1AQ02539 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC14□□□□□ -0.17
HIST1H1AQ02539 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HIST1H1AQ02539 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC14□□□□□ -0.17
HIST1H1AQ02539 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
HIST1H1AQ02539 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14□□□□□ -0.17
HIST1H1AQ02539 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14□□□□□ -0.17
HIST1H1AQ02539 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HIST1H1AQ02539 MTMR9LP-203ENST00000426597 1545 ntBASIC14□□□□□ -0.17
HIST1H1AQ02539 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
HIST1H1AQ02539 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 KRT8P32-201ENST00000512863 1461 ntBASIC13.99□□□□□ -0.17
HIST1H1AQ02539 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 NFYC-AS1-201ENST00000606277 1687 ntBASIC13.99□□□□□ -0.17
HIST1H1AQ02539 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 B3GAT3P1-201ENST00000471720 806 ntBASIC13.99□□□□□ -0.17
HIST1H1AQ02539 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 CKBP1-201ENST00000565489 1086 ntBASIC13.99□□□□□ -0.17
HIST1H1AQ02539 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 MYC-208ENST00000641036 567 ntBASIC13.99□□□□□ -0.17
HIST1H1AQ02539 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 RCC2P3-201ENST00000418112 1537 ntBASIC13.99□□□□□ -0.17
HIST1H1AQ02539 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC13.99□□□□□ -0.17
HIST1H1AQ02539 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H1AQ02539 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H1AQ02539 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC13.98□□□□□ -0.17
HIST1H1AQ02539 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H1AQ02539 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC13.98□□□□□ -0.17
HIST1H1AQ02539 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H1AQ02539 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
HIST1H1AQ02539 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H1AQ02539 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H1AQ02539 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC13.98□□□□□ -0.17
HIST1H1AQ02539 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H1AQ02539 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H1AQ02539 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H1AQ02539 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
HIST1H1AQ02539 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H1AQ02539 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
HIST1H1AQ02539 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H1AQ02539 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
HIST1H1AQ02539 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
HIST1H1AQ02539 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
HIST1H1AQ02539 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC13.98□□□□□ -0.17
HIST1H1AQ02539 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
HIST1H1AQ02539 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H1AQ02539 PEX7-202ENST00000367756 680 ntTSL 3 BASIC13.98□□□□□ -0.17
HIST1H1AQ02539 AC011506.1-201ENST00000474329 610 ntBASIC13.98□□□□□ -0.17
HIST1H1AQ02539 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC13.98□□□□□ -0.17
HIST1H1AQ02539 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms