Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.36■□□□□ 0.53
AP1S1P61966 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.36■□□□□ 0.53
AP1S1P61966 PHGDH-209ENST00000641074 1780 ntBASIC18.36■□□□□ 0.53
AP1S1P61966 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP1S1P61966 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP1S1P61966 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP1S1P61966 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP1S1P61966 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
AP1S1P61966 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP1S1P61966 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP1S1P61966 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
AP1S1P61966 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.35■□□□□ 0.53
AP1S1P61966 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.35■□□□□ 0.53
AP1S1P61966 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
AP1S1P61966 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP1S1P61966 KRT8P26-201ENST00000534154 1276 ntBASIC18.35■□□□□ 0.53
AP1S1P61966 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.35■□□□□ 0.53
AP1S1P61966 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
AP1S1P61966 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.35■□□□□ 0.53
AP1S1P61966 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.35■□□□□ 0.53
AP1S1P61966 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP1S1P61966 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
AP1S1P61966 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP1S1P61966 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
AP1S1P61966 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.35■□□□□ 0.53
AP1S1P61966 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.35■□□□□ 0.53
AP1S1P61966 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP1S1P61966 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP1S1P61966 AC093010.1-201ENST00000473625 1624 ntBASIC18.34■□□□□ 0.53
AP1S1P61966 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP1S1P61966 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP1S1P61966 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
AP1S1P61966 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
AP1S1P61966 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.34■□□□□ 0.53
AP1S1P61966 AC104581.1-202ENST00000635932 2618 ntBASIC18.34■□□□□ 0.53
AP1S1P61966 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP1S1P61966 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP1S1P61966 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
AP1S1P61966 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
AP1S1P61966 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP1S1P61966 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.34■□□□□ 0.53
AP1S1P61966 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.34■□□□□ 0.53
AP1S1P61966 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.34■□□□□ 0.53
AP1S1P61966 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
AP1S1P61966 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.34■□□□□ 0.53
AP1S1P61966 AL121672.3-201ENST00000608644 468 ntBASIC18.34■□□□□ 0.53
AP1S1P61966 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
AP1S1P61966 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
AP1S1P61966 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP1S1P61966 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP1S1P61966 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP1S1P61966 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
AP1S1P61966 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP1S1P61966 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP1S1P61966 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP1S1P61966 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP1S1P61966 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP1S1P61966 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP1S1P61966 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.33■□□□□ 0.53
AP1S1P61966 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.33■□□□□ 0.53
AP1S1P61966 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
AP1S1P61966 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
AP1S1P61966 LINC00167-201ENST00000530583 1419 ntBASIC18.33■□□□□ 0.53
AP1S1P61966 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
AP1S1P61966 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
AP1S1P61966 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
AP1S1P61966 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
AP1S1P61966 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.33■□□□□ 0.53
AP1S1P61966 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
AP1S1P61966 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP1S1P61966 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP1S1P61966 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
AP1S1P61966 BX276092.5-203ENST00000456199 560 ntBASIC18.33■□□□□ 0.52
AP1S1P61966 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
AP1S1P61966 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
AP1S1P61966 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP1S1P61966 AC135776.1-201ENST00000319817 2481 ntBASIC18.33■□□□□ 0.52
AP1S1P61966 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
AP1S1P61966 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP1S1P61966 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
AP1S1P61966 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.33■□□□□ 0.52
AP1S1P61966 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.32■□□□□ 0.52
AP1S1P61966 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
AP1S1P61966 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
AP1S1P61966 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
AP1S1P61966 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.32■□□□□ 0.52
AP1S1P61966 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP1S1P61966 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP1S1P61966 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
AP1S1P61966 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.32■□□□□ 0.52
AP1S1P61966 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
AP1S1P61966 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP1S1P61966 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
AP1S1P61966 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.32■□□□□ 0.52
AP1S1P61966 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.32■□□□□ 0.52
AP1S1P61966 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
AP1S1P61966 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
AP1S1P61966 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
AP1S1P61966 AC069148.1-201ENST00000608741 768 ntBASIC18.32■□□□□ 0.52
AP1S1P61966 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms