Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PEX3P56589 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PEX3P56589 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
PEX3P56589 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
PEX3P56589 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PEX3P56589 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PEX3P56589 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PEX3P56589 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
PEX3P56589 PHGDH-209ENST00000641074 1780 ntBASIC20.08■□□□□ 0.81
PEX3P56589 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PEX3P56589 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.08■□□□□ 0.81
PEX3P56589 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PEX3P56589 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PEX3P56589 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PEX3P56589 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
PEX3P56589 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PEX3P56589 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PEX3P56589 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.08■□□□□ 0.81
PEX3P56589 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.08■□□□□ 0.81
PEX3P56589 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.08■□□□□ 0.81
PEX3P56589 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PEX3P56589 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.08■□□□□ 0.81
PEX3P56589 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.08■□□□□ 0.81
PEX3P56589 AC008687.5-201ENST00000593746 558 ntBASIC20.08■□□□□ 0.81
PEX3P56589 GPR32P1-201ENST00000601788 811 ntBASIC20.08■□□□□ 0.81
PEX3P56589 AL390719.2-201ENST00000606993 987 ntBASIC20.08■□□□□ 0.81
PEX3P56589 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.08■□□□□ 0.81
PEX3P56589 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.08■□□□□ 0.81
PEX3P56589 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PEX3P56589 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.08■□□□□ 0.8
PEX3P56589 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PEX3P56589 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PEX3P56589 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.08■□□□□ 0.8
PEX3P56589 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.08■□□□□ 0.8
PEX3P56589 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PEX3P56589 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
PEX3P56589 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PEX3P56589 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.07■□□□□ 0.8
PEX3P56589 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.07■□□□□ 0.8
PEX3P56589 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
PEX3P56589 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.07■□□□□ 0.8
PEX3P56589 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.07■□□□□ 0.8
PEX3P56589 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PEX3P56589 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
PEX3P56589 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PEX3P56589 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
PEX3P56589 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
PEX3P56589 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PEX3P56589 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
PEX3P56589 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PEX3P56589 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PEX3P56589 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PEX3P56589 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PEX3P56589 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PEX3P56589 TSPY22P-201ENST00000427496 604 ntBASIC20.07■□□□□ 0.8
PEX3P56589 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.07■□□□□ 0.8
PEX3P56589 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.07■□□□□ 0.8
PEX3P56589 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.07■□□□□ 0.8
PEX3P56589 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PEX3P56589 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.07■□□□□ 0.8
PEX3P56589 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.07■□□□□ 0.8
PEX3P56589 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PEX3P56589 AC004263.2-201ENST00000617183 678 ntBASIC20.07■□□□□ 0.8
PEX3P56589 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.07■□□□□ 0.8
PEX3P56589 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.07■□□□□ 0.8
PEX3P56589 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.07■□□□□ 0.8
PEX3P56589 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PEX3P56589 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PEX3P56589 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PEX3P56589 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PEX3P56589 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PEX3P56589 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PEX3P56589 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PEX3P56589 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PEX3P56589 AC093677.2-201ENST00000600169 1863 ntBASIC20.07■□□□□ 0.8
PEX3P56589 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
PEX3P56589 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.07■□□□□ 0.8
PEX3P56589 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PEX3P56589 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PEX3P56589 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PEX3P56589 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PEX3P56589 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PEX3P56589 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PEX3P56589 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PEX3P56589 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
PEX3P56589 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PEX3P56589 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
PEX3P56589 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PEX3P56589 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PEX3P56589 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.06■□□□□ 0.8
PEX3P56589 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PEX3P56589 AC113404.2-201ENST00000507884 177 ntBASIC20.06■□□□□ 0.8
PEX3P56589 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
PEX3P56589 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.06■□□□□ 0.8
PEX3P56589 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.06■□□□□ 0.8
PEX3P56589 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PEX3P56589 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.06■□□□□ 0.8
PEX3P56589 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PEX3P56589 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.06■□□□□ 0.8
PEX3P56589 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms