Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 AL162727.3-201ENST00000635661 2787 ntBASIC17.03■□□□□ 0.32
CDH15P55291 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH15P55291 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.03■□□□□ 0.32
CDH15P55291 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH15P55291 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH15P55291 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH15P55291 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH15P55291 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH15P55291 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CDH15P55291 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH15P55291 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.03■□□□□ 0.32
CDH15P55291 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH15P55291 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.03■□□□□ 0.32
CDH15P55291 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CDH15P55291 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH15P55291 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH15P55291 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH15P55291 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH15P55291 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH15P55291 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH15P55291 KRT8P8-201ENST00000434750 1448 ntBASIC17.03■□□□□ 0.32
CDH15P55291 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH15P55291 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH15P55291 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH15P55291 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH15P55291 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH15P55291 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH15P55291 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH15P55291 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH15P55291 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CDH15P55291 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.02■□□□□ 0.32
CDH15P55291 FLJ13224-201ENST00000313737 1514 ntBASIC17.02■□□□□ 0.32
CDH15P55291 MTMR9LP-203ENST00000426597 1545 ntBASIC17.02■□□□□ 0.32
CDH15P55291 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH15P55291 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CDH15P55291 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CDH15P55291 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH15P55291 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH15P55291 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.02■□□□□ 0.32
CDH15P55291 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH15P55291 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.02■□□□□ 0.32
CDH15P55291 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CDH15P55291 UBE2SP1-201ENST00000450587 669 ntBASIC17.02■□□□□ 0.32
CDH15P55291 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
CDH15P55291 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH15P55291 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH15P55291 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.02■□□□□ 0.32
CDH15P55291 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH15P55291 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.02■□□□□ 0.32
CDH15P55291 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CDH15P55291 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH15P55291 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH15P55291 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
CDH15P55291 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CDH15P55291 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH15P55291 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH15P55291 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
CDH15P55291 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.02■□□□□ 0.31
CDH15P55291 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH15P55291 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH15P55291 LINC00602-201ENST00000629776 2065 ntBASIC17.01■□□□□ 0.31
CDH15P55291 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH15P55291 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CDH15P55291 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CDH15P55291 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.01■□□□□ 0.31
CDH15P55291 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH15P55291 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH15P55291 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH15P55291 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH15P55291 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH15P55291 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH15P55291 AL023806.1-201ENST00000603994 1649 ntBASIC17.01■□□□□ 0.31
CDH15P55291 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH15P55291 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.01■□□□□ 0.31
CDH15P55291 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH15P55291 KRT17P3-201ENST00000420566 1262 ntBASIC17.01■□□□□ 0.31
CDH15P55291 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH15P55291 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.01■□□□□ 0.31
CDH15P55291 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.01■□□□□ 0.31
CDH15P55291 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.01■□□□□ 0.31
CDH15P55291 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH15P55291 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.01■□□□□ 0.31
CDH15P55291 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH15P55291 AL359736.2-201ENST00000621992 437 ntBASIC17.01■□□□□ 0.31
CDH15P55291 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH15P55291 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH15P55291 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH15P55291 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH15P55291 AL391005.1-201ENST00000623953 2435 ntBASIC17.01■□□□□ 0.31
CDH15P55291 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CDH15P55291 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH15P55291 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH15P55291 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH15P55291 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH15P55291 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH15P55291 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH15P55291 PCDHB19P-201ENST00000570871 2371 ntBASIC17.01■□□□□ 0.31
CDH15P55291 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CDH15P55291 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH15P55291 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms