Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EPHA4P54764 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.55■□□□□ 0.4
EPHA4P54764 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
EPHA4P54764 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EPHA4P54764 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EPHA4P54764 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EPHA4P54764 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
EPHA4P54764 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
EPHA4P54764 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.55■□□□□ 0.4
EPHA4P54764 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.55■□□□□ 0.4
EPHA4P54764 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
EPHA4P54764 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.55■□□□□ 0.4
EPHA4P54764 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.55■□□□□ 0.4
EPHA4P54764 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.55■□□□□ 0.4
EPHA4P54764 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
EPHA4P54764 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
EPHA4P54764 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.55■□□□□ 0.4
EPHA4P54764 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.55■□□□□ 0.4
EPHA4P54764 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.55■□□□□ 0.4
EPHA4P54764 NSUN5P1-202ENST00000421140 1535 ntBASIC17.55■□□□□ 0.4
EPHA4P54764 NSUN5P2-203ENST00000457352 1529 ntBASIC17.55■□□□□ 0.4
EPHA4P54764 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
EPHA4P54764 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
EPHA4P54764 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
EPHA4P54764 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EPHA4P54764 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.55■□□□□ 0.4
EPHA4P54764 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
EPHA4P54764 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
EPHA4P54764 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.55■□□□□ 0.4
EPHA4P54764 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
EPHA4P54764 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EPHA4P54764 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
EPHA4P54764 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.54■□□□□ 0.4
EPHA4P54764 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
EPHA4P54764 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
EPHA4P54764 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
EPHA4P54764 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
EPHA4P54764 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EPHA4P54764 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
EPHA4P54764 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.54■□□□□ 0.4
EPHA4P54764 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
EPHA4P54764 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
EPHA4P54764 AL845331.1-201ENST00000424978 1190 ntBASIC17.54■□□□□ 0.4
EPHA4P54764 UNC93B7-201ENST00000509439 705 ntBASIC17.54■□□□□ 0.4
EPHA4P54764 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.54■□□□□ 0.4
EPHA4P54764 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
EPHA4P54764 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.54■□□□□ 0.4
EPHA4P54764 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
EPHA4P54764 AC138894.3-201ENST00000603787 634 ntBASIC17.54■□□□□ 0.4
EPHA4P54764 AL732292.2-201ENST00000609649 430 ntBASIC17.54■□□□□ 0.4
EPHA4P54764 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
EPHA4P54764 AC009154.2-201ENST00000621177 724 ntBASIC17.54■□□□□ 0.4
EPHA4P54764 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EPHA4P54764 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EPHA4P54764 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.54■□□□□ 0.4
EPHA4P54764 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.54■□□□□ 0.4
EPHA4P54764 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EPHA4P54764 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
EPHA4P54764 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
EPHA4P54764 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EPHA4P54764 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EPHA4P54764 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.53■□□□□ 0.4
EPHA4P54764 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.53■□□□□ 0.4
EPHA4P54764 AP000974.1-201ENST00000623909 2387 ntBASIC17.53■□□□□ 0.4
EPHA4P54764 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
EPHA4P54764 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EPHA4P54764 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EPHA4P54764 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
EPHA4P54764 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
EPHA4P54764 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
EPHA4P54764 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.53■□□□□ 0.4
EPHA4P54764 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
EPHA4P54764 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.53■□□□□ 0.4
EPHA4P54764 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.53■□□□□ 0.4
EPHA4P54764 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.53■□□□□ 0.4
EPHA4P54764 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.53■□□□□ 0.4
EPHA4P54764 AP005901.3-202ENST00000581653 237 ntBASIC17.53■□□□□ 0.4
EPHA4P54764 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.53■□□□□ 0.4
EPHA4P54764 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
EPHA4P54764 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
EPHA4P54764 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
EPHA4P54764 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
EPHA4P54764 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
EPHA4P54764 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.53■□□□□ 0.4
EPHA4P54764 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EPHA4P54764 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
EPHA4P54764 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
EPHA4P54764 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
EPHA4P54764 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
EPHA4P54764 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
EPHA4P54764 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
EPHA4P54764 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
EPHA4P54764 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
EPHA4P54764 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
EPHA4P54764 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
EPHA4P54764 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
EPHA4P54764 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
EPHA4P54764 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
EPHA4P54764 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
EPHA4P54764 POM121L3P-201ENST00000419331 1163 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms