Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.05■□□□□ 0.8
ATN1P54259 AC009102.3-201ENST00000623118 1491 ntBASIC20.05■□□□□ 0.8
ATN1P54259 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATN1P54259 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
ATN1P54259 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATN1P54259 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATN1P54259 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ATN1P54259 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATN1P54259 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.05■□□□□ 0.8
ATN1P54259 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATN1P54259 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATN1P54259 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
ATN1P54259 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC20.05■□□□□ 0.8
ATN1P54259 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.05■□□□□ 0.8
ATN1P54259 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.05■□□□□ 0.8
ATN1P54259 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.05■□□□□ 0.8
ATN1P54259 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
ATN1P54259 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.05■□□□□ 0.8
ATN1P54259 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATN1P54259 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATN1P54259 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATN1P54259 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.05■□□□□ 0.8
ATN1P54259 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.05■□□□□ 0.8
ATN1P54259 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATN1P54259 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATN1P54259 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.04■□□□□ 0.8
ATN1P54259 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ATN1P54259 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
ATN1P54259 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.04■□□□□ 0.8
ATN1P54259 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ATN1P54259 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.04■□□□□ 0.8
ATN1P54259 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.04■□□□□ 0.8
ATN1P54259 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ATN1P54259 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.04■□□□□ 0.8
ATN1P54259 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.04■□□□□ 0.8
ATN1P54259 KRT18P41-201ENST00000518924 1277 ntBASIC20.04■□□□□ 0.8
ATN1P54259 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.04■□□□□ 0.8
ATN1P54259 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.04■□□□□ 0.8
ATN1P54259 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATN1P54259 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.04■□□□□ 0.8
ATN1P54259 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.04■□□□□ 0.8
ATN1P54259 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.04■□□□□ 0.8
ATN1P54259 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.04■□□□□ 0.8
ATN1P54259 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ATN1P54259 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATN1P54259 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATN1P54259 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
ATN1P54259 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.04■□□□□ 0.8
ATN1P54259 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATN1P54259 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.04■□□□□ 0.8
ATN1P54259 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATN1P54259 LINC00602-201ENST00000629776 2065 ntBASIC20.04■□□□□ 0.8
ATN1P54259 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATN1P54259 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC20.04■□□□□ 0.8
ATN1P54259 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ATN1P54259 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATN1P54259 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATN1P54259 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATN1P54259 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
ATN1P54259 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATN1P54259 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATN1P54259 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATN1P54259 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATN1P54259 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATN1P54259 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATN1P54259 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATN1P54259 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.03■□□□□ 0.8
ATN1P54259 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATN1P54259 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.03■□□□□ 0.8
ATN1P54259 AP006288.1-201ENST00000446065 395 ntBASIC20.03■□□□□ 0.8
ATN1P54259 CYMP-203ENST00000474680 1263 ntBASIC20.03■□□□□ 0.8
ATN1P54259 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.03■□□□□ 0.8
ATN1P54259 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATN1P54259 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.03■□□□□ 0.8
ATN1P54259 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
ATN1P54259 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATN1P54259 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.03■□□□□ 0.8
ATN1P54259 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATN1P54259 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.03■□□□□ 0.8
ATN1P54259 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATN1P54259 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATN1P54259 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATN1P54259 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATN1P54259 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATN1P54259 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATN1P54259 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATN1P54259 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ATN1P54259 AC125437.2-201ENST00000625180 2167 ntBASIC20.02■□□□□ 0.8
ATN1P54259 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATN1P54259 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATN1P54259 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
ATN1P54259 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.02■□□□□ 0.8
ATN1P54259 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATN1P54259 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATN1P54259 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.02■□□□□ 0.8
ATN1P54259 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.02■□□□□ 0.8
ATN1P54259 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC20.02■□□□□ 0.8
ATN1P54259 CFL1-212ENST00000531413 636 ntTSL 3 BASIC20.02■□□□□ 0.8
ATN1P54259 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.02■□□□□ 0.8
ATN1P54259 SNHG9-202ENST00000564014 471 ntBASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms