Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCR9P51686 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.09■□□□□ 0.17
CCR9P51686 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCR9P51686 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.09■□□□□ 0.17
CCR9P51686 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCR9P51686 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CCR9P51686 PHGDH-209ENST00000641074 1780 ntBASIC16.09■□□□□ 0.17
CCR9P51686 MESTP1-201ENST00000404287 994 ntBASIC16.09■□□□□ 0.17
CCR9P51686 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCR9P51686 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.09■□□□□ 0.17
CCR9P51686 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.09■□□□□ 0.17
CCR9P51686 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCR9P51686 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCR9P51686 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCR9P51686 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.09■□□□□ 0.17
CCR9P51686 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCR9P51686 AC141586.5-201ENST00000624546 2050 ntBASIC16.09■□□□□ 0.17
CCR9P51686 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCR9P51686 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCR9P51686 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCR9P51686 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCR9P51686 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCR9P51686 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCR9P51686 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCR9P51686 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.08■□□□□ 0.17
CCR9P51686 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.08■□□□□ 0.17
CCR9P51686 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CCR9P51686 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.08■□□□□ 0.17
CCR9P51686 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
CCR9P51686 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
CCR9P51686 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCR9P51686 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.08■□□□□ 0.16
CCR9P51686 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCR9P51686 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.08■□□□□ 0.16
CCR9P51686 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCR9P51686 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.08■□□□□ 0.16
CCR9P51686 C1QBPP2-201ENST00000528754 825 ntBASIC16.08■□□□□ 0.16
CCR9P51686 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCR9P51686 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.08■□□□□ 0.16
CCR9P51686 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.08■□□□□ 0.16
CCR9P51686 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCR9P51686 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.08■□□□□ 0.16
CCR9P51686 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.08■□□□□ 0.16
CCR9P51686 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCR9P51686 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCR9P51686 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCR9P51686 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCR9P51686 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.08■□□□□ 0.16
CCR9P51686 GPAT2P1-201ENST00000444924 1672 ntBASIC16.08■□□□□ 0.16
CCR9P51686 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCR9P51686 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCR9P51686 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCR9P51686 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CCR9P51686 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCR9P51686 AL645608.8-201ENST00000606034 2086 ntBASIC16.07■□□□□ 0.16
CCR9P51686 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CCR9P51686 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CCR9P51686 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCR9P51686 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCR9P51686 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCR9P51686 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
CCR9P51686 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCR9P51686 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCR9P51686 TNRC18P3-201ENST00000441896 2691 ntBASIC16.07■□□□□ 0.16
CCR9P51686 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCR9P51686 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.07■□□□□ 0.16
CCR9P51686 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCR9P51686 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.07■□□□□ 0.16
CCR9P51686 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.07■□□□□ 0.16
CCR9P51686 CA15P1-201ENST00000481698 905 ntBASIC16.07■□□□□ 0.16
CCR9P51686 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCR9P51686 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.07■□□□□ 0.16
CCR9P51686 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.07■□□□□ 0.16
CCR9P51686 DGCR10-201ENST00000609839 495 ntBASIC16.07■□□□□ 0.16
CCR9P51686 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.07■□□□□ 0.16
CCR9P51686 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.07■□□□□ 0.16
CCR9P51686 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCR9P51686 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCR9P51686 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCR9P51686 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.07■□□□□ 0.16
CCR9P51686 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CCR9P51686 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCR9P51686 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CCR9P51686 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCR9P51686 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.07■□□□□ 0.16
CCR9P51686 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCR9P51686 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CCR9P51686 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCR9P51686 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCR9P51686 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.07■□□□□ 0.16
CCR9P51686 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.07■□□□□ 0.16
CCR9P51686 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCR9P51686 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCR9P51686 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCR9P51686 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCR9P51686 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCR9P51686 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCR9P51686 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCR9P51686 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCR9P51686 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms