Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
KNTC1P50748 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
KNTC1P50748 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.31■□□□□ 0.36
KNTC1P50748 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
KNTC1P50748 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.31■□□□□ 0.36
KNTC1P50748 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.31■□□□□ 0.36
KNTC1P50748 AL139288.1-201ENST00000623748 933 ntBASIC17.31■□□□□ 0.36
KNTC1P50748 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
KNTC1P50748 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.31■□□□□ 0.36
KNTC1P50748 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
KNTC1P50748 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KNTC1P50748 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.31■□□□□ 0.36
KNTC1P50748 AC068472.1-201ENST00000474589 881 ntBASIC17.31■□□□□ 0.36
KNTC1P50748 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.31■□□□□ 0.36
KNTC1P50748 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KNTC1P50748 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.3■□□□□ 0.36
KNTC1P50748 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KNTC1P50748 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KNTC1P50748 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.3■□□□□ 0.36
KNTC1P50748 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.3■□□□□ 0.36
KNTC1P50748 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KNTC1P50748 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.3■□□□□ 0.36
KNTC1P50748 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KNTC1P50748 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KNTC1P50748 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KNTC1P50748 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KNTC1P50748 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KNTC1P50748 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KNTC1P50748 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.3■□□□□ 0.36
KNTC1P50748 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
KNTC1P50748 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.3■□□□□ 0.36
KNTC1P50748 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KNTC1P50748 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.3■□□□□ 0.36
KNTC1P50748 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.3■□□□□ 0.36
KNTC1P50748 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KNTC1P50748 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
KNTC1P50748 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.3■□□□□ 0.36
KNTC1P50748 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
KNTC1P50748 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
KNTC1P50748 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
KNTC1P50748 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
KNTC1P50748 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.29■□□□□ 0.36
KNTC1P50748 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.29■□□□□ 0.36
KNTC1P50748 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KNTC1P50748 RPS2P28-201ENST00000314255 741 ntBASIC17.29■□□□□ 0.36
KNTC1P50748 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.29■□□□□ 0.36
KNTC1P50748 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KNTC1P50748 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.29■□□□□ 0.36
KNTC1P50748 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.29■□□□□ 0.36
KNTC1P50748 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.29■□□□□ 0.36
KNTC1P50748 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.29■□□□□ 0.36
KNTC1P50748 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KNTC1P50748 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KNTC1P50748 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KNTC1P50748 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
KNTC1P50748 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.29■□□□□ 0.36
KNTC1P50748 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KNTC1P50748 AFG3L1P-217ENST00000557444 2447 ntBASIC17.29■□□□□ 0.36
KNTC1P50748 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KNTC1P50748 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
KNTC1P50748 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.29■□□□□ 0.36
KNTC1P50748 MCCD1P2-201ENST00000423228 335 ntBASIC17.29■□□□□ 0.36
KNTC1P50748 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.29■□□□□ 0.36
KNTC1P50748 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.29■□□□□ 0.36
KNTC1P50748 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.29■□□□□ 0.36
KNTC1P50748 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.29■□□□□ 0.36
KNTC1P50748 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
KNTC1P50748 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.29■□□□□ 0.36
KNTC1P50748 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KNTC1P50748 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
KNTC1P50748 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.29■□□□□ 0.36
KNTC1P50748 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.28■□□□□ 0.36
KNTC1P50748 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
KNTC1P50748 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
KNTC1P50748 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KNTC1P50748 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.28■□□□□ 0.36
KNTC1P50748 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KNTC1P50748 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.28■□□□□ 0.36
KNTC1P50748 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.28■□□□□ 0.36
KNTC1P50748 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.28■□□□□ 0.36
KNTC1P50748 MIR3687-2-201ENST00000577708 61 ntBASIC17.28■□□□□ 0.36
KNTC1P50748 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.28■□□□□ 0.36
KNTC1P50748 Z83851.2-201ENST00000609564 659 ntBASIC17.28■□□□□ 0.36
KNTC1P50748 MIR3687-1-201ENST00000614492 61 ntBASIC17.28■□□□□ 0.36
KNTC1P50748 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
KNTC1P50748 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KNTC1P50748 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KNTC1P50748 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
KNTC1P50748 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.28■□□□□ 0.36
KNTC1P50748 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.28■□□□□ 0.36
KNTC1P50748 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
KNTC1P50748 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.28■□□□□ 0.36
KNTC1P50748 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KNTC1P50748 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.28■□□□□ 0.36
KNTC1P50748 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.28■□□□□ 0.36
KNTC1P50748 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
KNTC1P50748 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.28■□□□□ 0.36
KNTC1P50748 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
KNTC1P50748 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KNTC1P50748 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms