Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
PCP4P48539 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
PCP4P48539 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PCP4P48539 AOC4P-203ENST00000566825 2289 ntBASIC12.55□□□□□ -0.4
PCP4P48539 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.55□□□□□ -0.4
PCP4P48539 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.55□□□□□ -0.4
PCP4P48539 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PCP4P48539 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PCP4P48539 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PCP4P48539 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PCP4P48539 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PCP4P48539 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC12.55□□□□□ -0.4
PCP4P48539 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PCP4P48539 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC12.54□□□□□ -0.4
PCP4P48539 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PCP4P48539 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PCP4P48539 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PCP4P48539 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PCP4P48539 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PCP4P48539 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.54□□□□□ -0.4
PCP4P48539 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
PCP4P48539 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PCP4P48539 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PCP4P48539 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PCP4P48539 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
PCP4P48539 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PCP4P48539 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PCP4P48539 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PCP4P48539 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PCP4P48539 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PCP4P48539 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC12.54□□□□□ -0.4
PCP4P48539 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
PCP4P48539 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
PCP4P48539 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PCP4P48539 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PCP4P48539 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC12.54□□□□□ -0.4
PCP4P48539 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PCP4P48539 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PCP4P48539 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PCP4P48539 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PCP4P48539 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
PCP4P48539 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PCP4P48539 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
PCP4P48539 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
PCP4P48539 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
PCP4P48539 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC12.54□□□□□ -0.4
PCP4P48539 AC006058.4-201ENST00000624016 1670 ntBASIC12.54□□□□□ -0.4
PCP4P48539 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PCP4P48539 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
PCP4P48539 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PCP4P48539 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCP4P48539 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCP4P48539 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PCP4P48539 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC12.53□□□□□ -0.4
PCP4P48539 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCP4P48539 AGGF1P2-201ENST00000426656 2106 ntBASIC12.53□□□□□ -0.4
PCP4P48539 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCP4P48539 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
PCP4P48539 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCP4P48539 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
PCP4P48539 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCP4P48539 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
PCP4P48539 AC005562.1-201ENST00000583030 3219 ntBASIC12.53□□□□□ -0.4
PCP4P48539 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.53□□□□□ -0.4
PCP4P48539 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCP4P48539 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCP4P48539 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCP4P48539 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCP4P48539 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCP4P48539 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
PCP4P48539 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
PCP4P48539 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCP4P48539 BX324167.2-201ENST00000623717 3316 ntBASIC12.53□□□□□ -0.4
PCP4P48539 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
PCP4P48539 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCP4P48539 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCP4P48539 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCP4P48539 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCP4P48539 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC12.53□□□□□ -0.4
PCP4P48539 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.53□□□□□ -0.4
PCP4P48539 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC12.53□□□□□ -0.4
PCP4P48539 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC12.53□□□□□ -0.4
PCP4P48539 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCP4P48539 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC12.53□□□□□ -0.4
PCP4P48539 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCP4P48539 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
PCP4P48539 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCP4P48539 Z98044.1-201ENST00000632503 1764 ntBASIC12.53□□□□□ -0.4
PCP4P48539 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.53□□□□□ -0.4
PCP4P48539 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PCP4P48539 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCP4P48539 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC12.53□□□□□ -0.4
PCP4P48539 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCP4P48539 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC12.53□□□□□ -0.4
PCP4P48539 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PCP4P48539 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCP4P48539 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCP4P48539 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PCP4P48539 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
PCP4P48539 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms