Protein–RNA interactions for Protein: P36222

CHI3L1, Chitinase-3-like protein 1, humanhuman

Predicted RBP Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHI3L1P36222 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.31■□□□□ 0.36
CHI3L1P36222 OR6D1P-203ENST00000641209 4860 ntBASIC17.31■□□□□ 0.36
CHI3L1P36222 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.31■□□□□ 0.36
CHI3L1P36222 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHI3L1P36222 AC067852.2-201ENST00000590513 2313 ntBASIC17.31■□□□□ 0.36
CHI3L1P36222 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHI3L1P36222 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CHI3L1P36222 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHI3L1P36222 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.31■□□□□ 0.36
CHI3L1P36222 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
CHI3L1P36222 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHI3L1P36222 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHI3L1P36222 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.3■□□□□ 0.36
CHI3L1P36222 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.3■□□□□ 0.36
CHI3L1P36222 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHI3L1P36222 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHI3L1P36222 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHI3L1P36222 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHI3L1P36222 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHI3L1P36222 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CHI3L1P36222 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHI3L1P36222 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHI3L1P36222 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHI3L1P36222 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHI3L1P36222 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.3■□□□□ 0.36
CHI3L1P36222 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.3■□□□□ 0.36
CHI3L1P36222 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CHI3L1P36222 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHI3L1P36222 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.3■□□□□ 0.36
CHI3L1P36222 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.3■□□□□ 0.36
CHI3L1P36222 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHI3L1P36222 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.3■□□□□ 0.36
CHI3L1P36222 AP005242.2-201ENST00000580065 1175 ntBASIC17.3■□□□□ 0.36
CHI3L1P36222 MIR4674-201ENST00000582457 87 ntBASIC17.3■□□□□ 0.36
CHI3L1P36222 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.3■□□□□ 0.36
CHI3L1P36222 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.3■□□□□ 0.36
CHI3L1P36222 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.3■□□□□ 0.36
CHI3L1P36222 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.3■□□□□ 0.36
CHI3L1P36222 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHI3L1P36222 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHI3L1P36222 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHI3L1P36222 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.3■□□□□ 0.36
CHI3L1P36222 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.3■□□□□ 0.36
CHI3L1P36222 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.3■□□□□ 0.36
CHI3L1P36222 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CHI3L1P36222 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHI3L1P36222 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHI3L1P36222 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.29■□□□□ 0.36
CHI3L1P36222 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHI3L1P36222 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHI3L1P36222 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.29■□□□□ 0.36
CHI3L1P36222 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.29■□□□□ 0.36
CHI3L1P36222 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHI3L1P36222 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHI3L1P36222 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.29■□□□□ 0.36
CHI3L1P36222 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHI3L1P36222 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.29■□□□□ 0.36
CHI3L1P36222 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHI3L1P36222 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CHI3L1P36222 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHI3L1P36222 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHI3L1P36222 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.29■□□□□ 0.36
CHI3L1P36222 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHI3L1P36222 UNC93B2-201ENST00000285383 730 ntBASIC17.29■□□□□ 0.36
CHI3L1P36222 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHI3L1P36222 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.29■□□□□ 0.36
CHI3L1P36222 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHI3L1P36222 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHI3L1P36222 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHI3L1P36222 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHI3L1P36222 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.29■□□□□ 0.36
CHI3L1P36222 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.29■□□□□ 0.36
CHI3L1P36222 Z99916.2-201ENST00000604037 246 ntBASIC17.29■□□□□ 0.36
CHI3L1P36222 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.29■□□□□ 0.36
CHI3L1P36222 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHI3L1P36222 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CHI3L1P36222 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHI3L1P36222 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.29■□□□□ 0.36
CHI3L1P36222 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CHI3L1P36222 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHI3L1P36222 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CHI3L1P36222 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHI3L1P36222 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CHI3L1P36222 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.29■□□□□ 0.36
CHI3L1P36222 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHI3L1P36222 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.29■□□□□ 0.36
CHI3L1P36222 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHI3L1P36222 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHI3L1P36222 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.29■□□□□ 0.36
CHI3L1P36222 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHI3L1P36222 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHI3L1P36222 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHI3L1P36222 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHI3L1P36222 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHI3L1P36222 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.28■□□□□ 0.36
CHI3L1P36222 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.28■□□□□ 0.36
CHI3L1P36222 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
CHI3L1P36222 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHI3L1P36222 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHI3L1P36222 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms