Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLP35914 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLP35914 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLP35914 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.15■□□□□ 0.5
HMGCLP35914 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLP35914 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLP35914 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLP35914 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLP35914 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLP35914 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.15■□□□□ 0.5
HMGCLP35914 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.15■□□□□ 0.5
HMGCLP35914 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLP35914 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
HMGCLP35914 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLP35914 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.15■□□□□ 0.5
HMGCLP35914 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLP35914 MIR1224-201ENST00000408193 85 ntBASIC18.15■□□□□ 0.5
HMGCLP35914 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLP35914 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLP35914 AP003733.1-201ENST00000491725 852 ntBASIC18.15■□□□□ 0.5
HMGCLP35914 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.15■□□□□ 0.5
HMGCLP35914 REXO1L9P-201ENST00000604264 2108 ntBASIC18.15■□□□□ 0.5
HMGCLP35914 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.15■□□□□ 0.5
HMGCLP35914 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLP35914 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
HMGCLP35914 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLP35914 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLP35914 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLP35914 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLP35914 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLP35914 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.15■□□□□ 0.5
HMGCLP35914 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.15■□□□□ 0.5
HMGCLP35914 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLP35914 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLP35914 AC020763.4-201ENST00000623414 4170 ntBASIC18.15■□□□□ 0.5
HMGCLP35914 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMGCLP35914 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
HMGCLP35914 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGCLP35914 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGCLP35914 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGCLP35914 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGCLP35914 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HMGCLP35914 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.14■□□□□ 0.49
HMGCLP35914 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.14■□□□□ 0.49
HMGCLP35914 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGCLP35914 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HMGCLP35914 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGCLP35914 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGCLP35914 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGCLP35914 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGCLP35914 IGHGP-201ENST00000390555 1178 ntBASIC18.14■□□□□ 0.49
HMGCLP35914 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.14■□□□□ 0.49
HMGCLP35914 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HMGCLP35914 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGCLP35914 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.14■□□□□ 0.49
HMGCLP35914 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.14■□□□□ 0.49
HMGCLP35914 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.14■□□□□ 0.49
HMGCLP35914 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.14■□□□□ 0.49
HMGCLP35914 AC087388.1-201ENST00000571370 1112 ntBASIC18.14■□□□□ 0.49
HMGCLP35914 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.14■□□□□ 0.49
HMGCLP35914 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.14■□□□□ 0.49
HMGCLP35914 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.14■□□□□ 0.49
HMGCLP35914 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.14■□□□□ 0.49
HMGCLP35914 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGCLP35914 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.14■□□□□ 0.49
HMGCLP35914 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGCLP35914 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGCLP35914 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGCLP35914 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGCLP35914 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
HMGCLP35914 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.14■□□□□ 0.49
HMGCLP35914 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
HMGCLP35914 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.14■□□□□ 0.49
HMGCLP35914 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGCLP35914 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.13■□□□□ 0.49
HMGCLP35914 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.13■□□□□ 0.49
HMGCLP35914 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.13■□□□□ 0.49
HMGCLP35914 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGCLP35914 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.13■□□□□ 0.49
HMGCLP35914 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGCLP35914 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGCLP35914 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HMGCLP35914 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HMGCLP35914 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HMGCLP35914 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGCLP35914 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HMGCLP35914 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HMGCLP35914 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HMGCLP35914 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGCLP35914 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.13■□□□□ 0.49
HMGCLP35914 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGCLP35914 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HMGCLP35914 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGCLP35914 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGCLP35914 AL645929.1-201ENST00000420084 975 ntBASIC18.13■□□□□ 0.49
HMGCLP35914 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGCLP35914 KRT18P35-201ENST00000510488 1269 ntBASIC18.13■□□□□ 0.49
HMGCLP35914 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.13■□□□□ 0.49
HMGCLP35914 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
HMGCLP35914 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms