Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC22.33■■□□□ 1.17
CHRNA5P30532 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC22.33■■□□□ 1.17
CHRNA5P30532 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
CHRNA5P30532 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CHRNA5P30532 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CHRNA5P30532 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
CHRNA5P30532 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CHRNA5P30532 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC22.33■■□□□ 1.17
CHRNA5P30532 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC22.33■■□□□ 1.17
CHRNA5P30532 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CHRNA5P30532 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CHRNA5P30532 AC106028.4-201ENST00000614509 607 ntBASIC22.33■■□□□ 1.17
CHRNA5P30532 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC22.33■■□□□ 1.17
CHRNA5P30532 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.17
CHRNA5P30532 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
CHRNA5P30532 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
CHRNA5P30532 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
CHRNA5P30532 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
CHRNA5P30532 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC22.32■■□□□ 1.16
CHRNA5P30532 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
CHRNA5P30532 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CHRNA5P30532 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
CHRNA5P30532 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC22.32■■□□□ 1.16
CHRNA5P30532 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CHRNA5P30532 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
CHRNA5P30532 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CHRNA5P30532 LINC01126-201ENST00000623515 1646 ntBASIC22.32■■□□□ 1.16
CHRNA5P30532 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CHRNA5P30532 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC22.32■■□□□ 1.16
CHRNA5P30532 AC254562.1-201ENST00000417586 456 ntBASIC22.32■■□□□ 1.16
CHRNA5P30532 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC22.32■■□□□ 1.16
CHRNA5P30532 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC22.32■■□□□ 1.16
CHRNA5P30532 AL645939.2-201ENST00000427340 991 ntBASIC22.32■■□□□ 1.16
CHRNA5P30532 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CHRNA5P30532 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC22.32■■□□□ 1.16
CHRNA5P30532 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC22.32■■□□□ 1.16
CHRNA5P30532 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC22.32■■□□□ 1.16
CHRNA5P30532 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CHRNA5P30532 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC22.31■■□□□ 1.16
CHRNA5P30532 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC22.31■■□□□ 1.16
CHRNA5P30532 AC079776.2-201ENST00000641154 1609 ntBASIC22.31■■□□□ 1.16
CHRNA5P30532 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
CHRNA5P30532 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC22.31■■□□□ 1.16
CHRNA5P30532 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHRNA5P30532 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHRNA5P30532 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
CHRNA5P30532 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
CHRNA5P30532 WDR53-203ENST00000429115 683 ntTSL 2 BASIC22.31■■□□□ 1.16
CHRNA5P30532 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC22.31■■□□□ 1.16
CHRNA5P30532 KRT18P65-201ENST00000439811 1286 ntBASIC22.31■■□□□ 1.16
CHRNA5P30532 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC22.31■■□□□ 1.16
CHRNA5P30532 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHRNA5P30532 AC112698.1-201ENST00000510299 916 ntBASIC22.31■■□□□ 1.16
CHRNA5P30532 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC22.31■■□□□ 1.16
CHRNA5P30532 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC22.31■■□□□ 1.16
CHRNA5P30532 AL022326.1-202ENST00000641533 845 ntBASIC22.31■■□□□ 1.16
CHRNA5P30532 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHRNA5P30532 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC22.31■■□□□ 1.16
CHRNA5P30532 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC22.31■■□□□ 1.16
CHRNA5P30532 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.3■■□□□ 1.16
CHRNA5P30532 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CHRNA5P30532 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
CHRNA5P30532 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHRNA5P30532 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC22.3■■□□□ 1.16
CHRNA5P30532 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHRNA5P30532 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHRNA5P30532 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CHRNA5P30532 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHRNA5P30532 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CHRNA5P30532 AL035633.1-201ENST00000406139 838 ntBASIC22.3■■□□□ 1.16
CHRNA5P30532 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC22.3■■□□□ 1.16
CHRNA5P30532 CNN2P11-201ENST00000429351 262 ntBASIC22.3■■□□□ 1.16
CHRNA5P30532 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC22.3■■□□□ 1.16
CHRNA5P30532 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC22.3■■□□□ 1.16
CHRNA5P30532 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
CHRNA5P30532 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC22.3■■□□□ 1.16
CHRNA5P30532 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CHRNA5P30532 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
CHRNA5P30532 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC22.3■■□□□ 1.16
CHRNA5P30532 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CHRNA5P30532 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC22.3■■□□□ 1.16
CHRNA5P30532 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC22.3■■□□□ 1.16
CHRNA5P30532 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHRNA5P30532 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHRNA5P30532 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHRNA5P30532 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC22.3■■□□□ 1.16
CHRNA5P30532 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHRNA5P30532 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CHRNA5P30532 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHRNA5P30532 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC22.29■■□□□ 1.16
CHRNA5P30532 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHRNA5P30532 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
CHRNA5P30532 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CHRNA5P30532 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHRNA5P30532 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CHRNA5P30532 AL158211.5-201ENST00000623583 2518 ntBASIC22.29■■□□□ 1.16
CHRNA5P30532 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CHRNA5P30532 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CHRNA5P30532 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
CHRNA5P30532 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms