Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AC012317.2-201ENST00000623305 2251 ntBASIC17.59■□□□□ 0.41
CAPN3P20807 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CAPN3P20807 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CAPN3P20807 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.59■□□□□ 0.41
CAPN3P20807 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CAPN3P20807 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.59■□□□□ 0.41
CAPN3P20807 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CAPN3P20807 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CAPN3P20807 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CAPN3P20807 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CAPN3P20807 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CAPN3P20807 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.59■□□□□ 0.41
CAPN3P20807 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.59■□□□□ 0.41
CAPN3P20807 KSR1P1-201ENST00000446298 240 ntBASIC17.59■□□□□ 0.41
CAPN3P20807 AP002982.1-201ENST00000492365 877 ntBASIC17.59■□□□□ 0.41
CAPN3P20807 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.59■□□□□ 0.41
CAPN3P20807 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.59■□□□□ 0.41
CAPN3P20807 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.59■□□□□ 0.41
CAPN3P20807 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CAPN3P20807 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CAPN3P20807 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CAPN3P20807 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CAPN3P20807 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CAPN3P20807 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CAPN3P20807 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CAPN3P20807 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CAPN3P20807 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
CAPN3P20807 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.58■□□□□ 0.41
CAPN3P20807 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CAPN3P20807 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.58■□□□□ 0.41
CAPN3P20807 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CAPN3P20807 GMCL1P1-201ENST00000463439 1581 ntBASIC17.58■□□□□ 0.41
CAPN3P20807 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.58■□□□□ 0.41
CAPN3P20807 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
CAPN3P20807 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CAPN3P20807 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.58■□□□□ 0.4
CAPN3P20807 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CAPN3P20807 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CAPN3P20807 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CAPN3P20807 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CAPN3P20807 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CAPN3P20807 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CAPN3P20807 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CAPN3P20807 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.58■□□□□ 0.4
CAPN3P20807 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.58■□□□□ 0.4
CAPN3P20807 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CAPN3P20807 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CAPN3P20807 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.58■□□□□ 0.4
CAPN3P20807 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.58■□□□□ 0.4
CAPN3P20807 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CAPN3P20807 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CAPN3P20807 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CAPN3P20807 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CAPN3P20807 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CAPN3P20807 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CAPN3P20807 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.57■□□□□ 0.4
CAPN3P20807 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CAPN3P20807 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CAPN3P20807 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CAPN3P20807 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
CAPN3P20807 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.57■□□□□ 0.4
CAPN3P20807 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CAPN3P20807 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CAPN3P20807 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CAPN3P20807 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CAPN3P20807 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.57■□□□□ 0.4
CAPN3P20807 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.57■□□□□ 0.4
CAPN3P20807 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.57■□□□□ 0.4
CAPN3P20807 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.57■□□□□ 0.4
CAPN3P20807 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.57■□□□□ 0.4
CAPN3P20807 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CAPN3P20807 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CAPN3P20807 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.57■□□□□ 0.4
CAPN3P20807 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.57■□□□□ 0.4
CAPN3P20807 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.57■□□□□ 0.4
CAPN3P20807 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CAPN3P20807 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CAPN3P20807 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CAPN3P20807 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CAPN3P20807 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.56■□□□□ 0.4
CAPN3P20807 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CAPN3P20807 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CAPN3P20807 KRT16P1-201ENST00000399124 1418 ntBASIC17.56■□□□□ 0.4
CAPN3P20807 KRT8P50-201ENST00000562022 1438 ntBASIC17.56■□□□□ 0.4
CAPN3P20807 PP12613-201ENST00000424958 2230 ntBASIC17.56■□□□□ 0.4
CAPN3P20807 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CAPN3P20807 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.56■□□□□ 0.4
CAPN3P20807 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CAPN3P20807 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CAPN3P20807 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CAPN3P20807 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.56■□□□□ 0.4
CAPN3P20807 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CAPN3P20807 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CAPN3P20807 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CAPN3P20807 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.56■□□□□ 0.4
CAPN3P20807 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CAPN3P20807 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CAPN3P20807 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CAPN3P20807 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.56■□□□□ 0.4
CAPN3P20807 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms