Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC108073.2-201ENST00000464002 357 ntBASIC31.11■■■□□ 2.57
CFTRP13569 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC31.11■■■□□ 2.57
CFTRP13569 AL513190.1-201ENST00000621254 727 ntBASIC31.11■■■□□ 2.57
CFTRP13569 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CFTRP13569 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
CFTRP13569 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CFTRP13569 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CFTRP13569 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
CFTRP13569 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
CFTRP13569 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC31.11■■■□□ 2.57
CFTRP13569 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CFTRP13569 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CFTRP13569 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
CFTRP13569 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CFTRP13569 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CFTRP13569 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
CFTRP13569 AC122714.2-201ENST00000502787 707 ntBASIC31.1■■■□□ 2.57
CFTRP13569 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC31.1■■■□□ 2.57
CFTRP13569 AP002472.1-201ENST00000577490 586 ntBASIC31.1■■■□□ 2.57
CFTRP13569 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC31.1■■■□□ 2.57
CFTRP13569 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC31.1■■■□□ 2.57
CFTRP13569 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CFTRP13569 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC31.1■■■□□ 2.57
CFTRP13569 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC31.1■■■□□ 2.57
CFTRP13569 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC31.1■■■□□ 2.57
CFTRP13569 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC31.1■■■□□ 2.57
CFTRP13569 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CFTRP13569 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CFTRP13569 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC31.09■■■□□ 2.57
CFTRP13569 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CFTRP13569 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CFTRP13569 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
CFTRP13569 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CFTRP13569 AC096633.1-201ENST00000422446 749 ntBASIC31.09■■■□□ 2.57
CFTRP13569 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC31.09■■■□□ 2.57
CFTRP13569 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC31.09■■■□□ 2.57
CFTRP13569 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC31.09■■■□□ 2.57
CFTRP13569 MED29-202ENST00000594368 1471 ntTSL 2 BASIC31.09■■■□□ 2.57
CFTRP13569 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CFTRP13569 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CFTRP13569 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC31.09■■■□□ 2.57
CFTRP13569 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
CFTRP13569 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CFTRP13569 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CFTRP13569 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC31.08■■■□□ 2.57
CFTRP13569 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CFTRP13569 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CFTRP13569 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CFTRP13569 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
CFTRP13569 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CFTRP13569 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
CFTRP13569 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CFTRP13569 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CFTRP13569 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC31.08■■■□□ 2.57
CFTRP13569 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC31.08■■■□□ 2.57
CFTRP13569 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC31.08■■■□□ 2.57
CFTRP13569 AL078644.1-201ENST00000609881 752 ntBASIC31.08■■■□□ 2.57
CFTRP13569 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CFTRP13569 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CFTRP13569 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC31.07■■■□□ 2.56
CFTRP13569 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CFTRP13569 AC010460.3-201ENST00000511359 1579 ntBASIC31.07■■■□□ 2.56
CFTRP13569 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CFTRP13569 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC31.07■■■□□ 2.56
CFTRP13569 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC31.07■■■□□ 2.56
CFTRP13569 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CFTRP13569 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC31.07■■■□□ 2.56
CFTRP13569 SLC4A1APP2-201ENST00000424054 1259 ntBASIC31.07■■■□□ 2.56
CFTRP13569 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC31.07■■■□□ 2.56
CFTRP13569 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC31.07■■■□□ 2.56
CFTRP13569 AL589182.2-201ENST00000619332 1049 ntBASIC31.07■■■□□ 2.56
CFTRP13569 AC004706.3-202ENST00000621574 984 ntBASIC31.07■■■□□ 2.56
CFTRP13569 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC31.07■■■□□ 2.56
CFTRP13569 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC31.07■■■□□ 2.56
CFTRP13569 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC31.06■■■□□ 2.56
CFTRP13569 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC31.06■■■□□ 2.56
CFTRP13569 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
CFTRP13569 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC31.06■■■□□ 2.56
CFTRP13569 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CFTRP13569 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC31.06■■■□□ 2.56
CFTRP13569 PUS1-205ENST00000535067 838 ntTSL 3 BASIC31.06■■■□□ 2.56
CFTRP13569 AC018845.2-201ENST00000568326 409 ntBASIC31.06■■■□□ 2.56
CFTRP13569 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CFTRP13569 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CFTRP13569 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CFTRP13569 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC31.06■■■□□ 2.56
CFTRP13569 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC31.06■■■□□ 2.56
CFTRP13569 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC31.05■■■□□ 2.56
CFTRP13569 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
CFTRP13569 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CFTRP13569 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC31.05■■■□□ 2.56
CFTRP13569 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CFTRP13569 AC004817.3-201ENST00000602957 2129 ntBASIC31.05■■■□□ 2.56
CFTRP13569 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC31.05■■■□□ 2.56
CFTRP13569 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
CFTRP13569 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CFTRP13569 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CFTRP13569 IGLL3P-201ENST00000412472 434 ntBASIC31.05■■■□□ 2.56
CFTRP13569 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC31.05■■■□□ 2.56
CFTRP13569 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC31.05■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms