Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DEFA4P12838 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
DEFA4P12838 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC14.87□□□□□ -0.03
DEFA4P12838 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DEFA4P12838 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC14.87□□□□□ -0.03
DEFA4P12838 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC14.87□□□□□ -0.03
DEFA4P12838 FAM197Y1-201ENST00000421178 764 ntBASIC14.87□□□□□ -0.03
DEFA4P12838 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
DEFA4P12838 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
DEFA4P12838 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
DEFA4P12838 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC14.87□□□□□ -0.03
DEFA4P12838 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC14.87□□□□□ -0.03
DEFA4P12838 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
DEFA4P12838 MIR6786-201ENST00000616843 113 ntBASIC14.87□□□□□ -0.03
DEFA4P12838 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC14.87□□□□□ -0.03
DEFA4P12838 ABBA01031674.1-201ENST00000635145 728 ntBASIC14.87□□□□□ -0.03
DEFA4P12838 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
DEFA4P12838 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
DEFA4P12838 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
DEFA4P12838 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.87□□□□□ -0.03
DEFA4P12838 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
DEFA4P12838 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DEFA4P12838 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DEFA4P12838 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
DEFA4P12838 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.87□□□□□ -0.03
DEFA4P12838 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
DEFA4P12838 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
DEFA4P12838 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
DEFA4P12838 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
DEFA4P12838 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
DEFA4P12838 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC14.87□□□□□ -0.03
DEFA4P12838 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DEFA4P12838 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DEFA4P12838 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
DEFA4P12838 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.86□□□□□ -0.03
DEFA4P12838 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DEFA4P12838 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DEFA4P12838 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.86□□□□□ -0.03
DEFA4P12838 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DEFA4P12838 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
DEFA4P12838 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DEFA4P12838 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.86□□□□□ -0.03
DEFA4P12838 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
DEFA4P12838 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DEFA4P12838 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DEFA4P12838 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DEFA4P12838 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
DEFA4P12838 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
DEFA4P12838 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
DEFA4P12838 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC14.86□□□□□ -0.03
DEFA4P12838 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DEFA4P12838 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.86□□□□□ -0.03
DEFA4P12838 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC14.86□□□□□ -0.03
DEFA4P12838 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
DEFA4P12838 CD177P1-201ENST00000606252 935 ntBASIC14.86□□□□□ -0.03
DEFA4P12838 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.86□□□□□ -0.03
DEFA4P12838 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DEFA4P12838 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DEFA4P12838 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DEFA4P12838 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
DEFA4P12838 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DEFA4P12838 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.86□□□□□ -0.03
DEFA4P12838 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DEFA4P12838 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DEFA4P12838 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DEFA4P12838 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
DEFA4P12838 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
DEFA4P12838 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
DEFA4P12838 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC14.86□□□□□ -0.03
DEFA4P12838 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.86□□□□□ -0.03
DEFA4P12838 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
DEFA4P12838 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DEFA4P12838 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
DEFA4P12838 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
DEFA4P12838 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DEFA4P12838 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
DEFA4P12838 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
DEFA4P12838 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DEFA4P12838 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DEFA4P12838 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC14.85□□□□□ -0.03
DEFA4P12838 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DEFA4P12838 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC14.85□□□□□ -0.03
DEFA4P12838 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
DEFA4P12838 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
DEFA4P12838 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
DEFA4P12838 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
DEFA4P12838 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
DEFA4P12838 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
DEFA4P12838 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
DEFA4P12838 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
DEFA4P12838 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
DEFA4P12838 PRORSD1P-201ENST00000295112 541 ntBASIC14.85□□□□□ -0.03
DEFA4P12838 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DEFA4P12838 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
DEFA4P12838 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.85□□□□□ -0.03
DEFA4P12838 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
DEFA4P12838 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC14.85□□□□□ -0.03
DEFA4P12838 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC14.85□□□□□ -0.03
DEFA4P12838 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC14.85□□□□□ -0.03
DEFA4P12838 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms