Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.48□□□□□ -0.09
PF4V1P10720 AL691432.3-201ENST00000621860 400 ntBASIC14.48□□□□□ -0.09
PF4V1P10720 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PF4V1P10720 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PF4V1P10720 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PF4V1P10720 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PF4V1P10720 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PF4V1P10720 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PF4V1P10720 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC14.48□□□□□ -0.09
PF4V1P10720 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC14.48□□□□□ -0.09
PF4V1P10720 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PF4V1P10720 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PF4V1P10720 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PF4V1P10720 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PF4V1P10720 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PF4V1P10720 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PF4V1P10720 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC14.48□□□□□ -0.09
PF4V1P10720 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PF4V1P10720 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC14.48□□□□□ -0.09
PF4V1P10720 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PF4V1P10720 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PF4V1P10720 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
PF4V1P10720 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PF4V1P10720 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC14.47□□□□□ -0.09
PF4V1P10720 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PF4V1P10720 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PF4V1P10720 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
PF4V1P10720 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PF4V1P10720 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.47□□□□□ -0.09
PF4V1P10720 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
PF4V1P10720 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PF4V1P10720 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PF4V1P10720 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PF4V1P10720 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PF4V1P10720 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.47□□□□□ -0.09
PF4V1P10720 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PF4V1P10720 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PF4V1P10720 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PF4V1P10720 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PF4V1P10720 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PF4V1P10720 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.47□□□□□ -0.09
PF4V1P10720 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.47□□□□□ -0.09
PF4V1P10720 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
PF4V1P10720 SEC1P-202ENST00000473944 940 ntBASIC14.47□□□□□ -0.09
PF4V1P10720 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PF4V1P10720 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.47□□□□□ -0.09
PF4V1P10720 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC14.47□□□□□ -0.09
PF4V1P10720 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.47□□□□□ -0.09
PF4V1P10720 AC009065.1-201ENST00000564055 1225 ntBASIC14.47□□□□□ -0.09
PF4V1P10720 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.47□□□□□ -0.09
PF4V1P10720 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.47□□□□□ -0.09
PF4V1P10720 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PF4V1P10720 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PF4V1P10720 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PF4V1P10720 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PF4V1P10720 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PF4V1P10720 AC112777.1-201ENST00000540175 1423 ntBASIC14.47□□□□□ -0.09
PF4V1P10720 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PF4V1P10720 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.47□□□□□ -0.09
PF4V1P10720 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
PF4V1P10720 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PF4V1P10720 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC14.47□□□□□ -0.09
PF4V1P10720 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PF4V1P10720 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PF4V1P10720 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PF4V1P10720 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC14.46□□□□□ -0.09
PF4V1P10720 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PF4V1P10720 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC14.46□□□□□ -0.09
PF4V1P10720 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PF4V1P10720 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC14.46□□□□□ -0.09
PF4V1P10720 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
PF4V1P10720 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PF4V1P10720 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.46□□□□□ -0.09
PF4V1P10720 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.46□□□□□ -0.09
PF4V1P10720 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC14.46□□□□□ -0.09
PF4V1P10720 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.46□□□□□ -0.09
PF4V1P10720 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PF4V1P10720 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.46□□□□□ -0.09
PF4V1P10720 AC104390.1-201ENST00000555663 520 ntBASIC14.46□□□□□ -0.09
PF4V1P10720 NAT14-202ENST00000587400 416 ntTSL 5 BASIC14.46□□□□□ -0.09
PF4V1P10720 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
PF4V1P10720 AC010240.3-201ENST00000607688 395 ntBASIC14.46□□□□□ -0.09
PF4V1P10720 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.46□□□□□ -0.09
PF4V1P10720 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.46□□□□□ -0.09
PF4V1P10720 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
PF4V1P10720 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PF4V1P10720 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
PF4V1P10720 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC14.46□□□□□ -0.09
PF4V1P10720 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
PF4V1P10720 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PF4V1P10720 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC14.46□□□□□ -0.1
PF4V1P10720 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PF4V1P10720 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PF4V1P10720 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PF4V1P10720 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PF4V1P10720 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC14.45□□□□□ -0.1
PF4V1P10720 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PF4V1P10720 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC14.45□□□□□ -0.1
PF4V1P10720 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PF4V1P10720 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms