Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
HLA-DPB1P04440 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DPB1P04440 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DPB1P04440 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DPB1P04440 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DPB1P04440 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DPB1P04440 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DPB1P04440 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
HLA-DPB1P04440 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.43■□□□□ 0.22
HLA-DPB1P04440 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.43■□□□□ 0.22
HLA-DPB1P04440 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
HLA-DPB1P04440 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DPB1P04440 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.43■□□□□ 0.22
HLA-DPB1P04440 AL645608.8-201ENST00000606034 2086 ntBASIC16.43■□□□□ 0.22
HLA-DPB1P04440 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DPB1P04440 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DPB1P04440 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DPB1P04440 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.43■□□□□ 0.22
HLA-DPB1P04440 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.43■□□□□ 0.22
HLA-DPB1P04440 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DPB1P04440 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DPB1P04440 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DPB1P04440 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DPB1P04440 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.43■□□□□ 0.22
HLA-DPB1P04440 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.43■□□□□ 0.22
HLA-DPB1P04440 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.43■□□□□ 0.22
HLA-DPB1P04440 AL353708.3-201ENST00000610272 989 ntBASIC16.43■□□□□ 0.22
HLA-DPB1P04440 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DPB1P04440 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DPB1P04440 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DPB1P04440 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
HLA-DPB1P04440 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
HLA-DPB1P04440 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.43■□□□□ 0.22
HLA-DPB1P04440 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.43■□□□□ 0.22
HLA-DPB1P04440 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DPB1P04440 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DPB1P04440 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
HLA-DPB1P04440 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
HLA-DPB1P04440 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.42■□□□□ 0.22
HLA-DPB1P04440 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HLA-DPB1P04440 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
HLA-DPB1P04440 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DPB1P04440 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DPB1P04440 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HLA-DPB1P04440 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DPB1P04440 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DPB1P04440 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-DPB1P04440 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
HLA-DPB1P04440 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DPB1P04440 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
HLA-DPB1P04440 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.42■□□□□ 0.22
HLA-DPB1P04440 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-DPB1P04440 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HLA-DPB1P04440 AC008556.1-201ENST00000610908 2040 ntBASIC16.42■□□□□ 0.22
HLA-DPB1P04440 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DPB1P04440 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DPB1P04440 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DPB1P04440 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DPB1P04440 RPS2P55-201ENST00000397318 883 ntBASIC16.42■□□□□ 0.22
HLA-DPB1P04440 FAM197Y1-201ENST00000421178 764 ntBASIC16.42■□□□□ 0.22
HLA-DPB1P04440 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.42■□□□□ 0.22
HLA-DPB1P04440 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DPB1P04440 KSR1P1-201ENST00000446298 240 ntBASIC16.42■□□□□ 0.22
HLA-DPB1P04440 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-DPB1P04440 AC107956.1-201ENST00000494359 873 ntBASIC16.42■□□□□ 0.22
HLA-DPB1P04440 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DPB1P04440 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.42■□□□□ 0.22
HLA-DPB1P04440 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.42■□□□□ 0.22
HLA-DPB1P04440 Z99916.2-201ENST00000604037 246 ntBASIC16.42■□□□□ 0.22
HLA-DPB1P04440 AC073195.1-201ENST00000607241 877 ntBASIC16.42■□□□□ 0.22
HLA-DPB1P04440 AL445675.2-201ENST00000620291 557 ntBASIC16.42■□□□□ 0.22
HLA-DPB1P04440 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
HLA-DPB1P04440 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DPB1P04440 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DPB1P04440 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DPB1P04440 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DPB1P04440 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HLA-DPB1P04440 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DPB1P04440 AL135905.2-201ENST00000584934 1404 ntBASIC16.42■□□□□ 0.22
HLA-DPB1P04440 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-DPB1P04440 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DPB1P04440 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DPB1P04440 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DPB1P04440 KRT8P32-201ENST00000512863 1461 ntBASIC16.42■□□□□ 0.22
HLA-DPB1P04440 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DPB1P04440 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DPB1P04440 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DPB1P04440 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DPB1P04440 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
HLA-DPB1P04440 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.41■□□□□ 0.22
HLA-DPB1P04440 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.41■□□□□ 0.22
HLA-DPB1P04440 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DPB1P04440 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DPB1P04440 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.41■□□□□ 0.22
HLA-DPB1P04440 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.41■□□□□ 0.22
HLA-DPB1P04440 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DPB1P04440 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DPB1P04440 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HLA-DPB1P04440 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.41■□□□□ 0.22
HLA-DPB1P04440 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms