Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-2O95096 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-2O95096 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.85■□□□□ 0.29
NKX2-2O95096 KRT89P-201ENST00000620027 1478 ntBASIC16.85■□□□□ 0.29
NKX2-2O95096 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-2O95096 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-2O95096 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-2O95096 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-2O95096 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.84■□□□□ 0.29
NKX2-2O95096 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-2O95096 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.84■□□□□ 0.29
NKX2-2O95096 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-2O95096 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-2O95096 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-2O95096 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-2O95096 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-2O95096 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.84■□□□□ 0.29
NKX2-2O95096 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.84■□□□□ 0.29
NKX2-2O95096 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-2O95096 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.84■□□□□ 0.29
NKX2-2O95096 SLC25A6P5-201ENST00000435663 894 ntBASIC16.84■□□□□ 0.29
NKX2-2O95096 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-2O95096 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-2O95096 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.84■□□□□ 0.29
NKX2-2O95096 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.84■□□□□ 0.29
NKX2-2O95096 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.84■□□□□ 0.29
NKX2-2O95096 AC024563.2-201ENST00000603282 481 ntBASIC16.84■□□□□ 0.29
NKX2-2O95096 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-2O95096 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-2O95096 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-2O95096 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
NKX2-2O95096 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
NKX2-2O95096 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
NKX2-2O95096 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-2O95096 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-2O95096 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NKX2-2O95096 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-2O95096 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-2O95096 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
NKX2-2O95096 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
NKX2-2O95096 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.83■□□□□ 0.29
NKX2-2O95096 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NKX2-2O95096 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NKX2-2O95096 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NKX2-2O95096 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NKX2-2O95096 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NKX2-2O95096 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NKX2-2O95096 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
NKX2-2O95096 NOC2LP2-201ENST00000407594 1944 ntBASIC16.83■□□□□ 0.28
NKX2-2O95096 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.83■□□□□ 0.28
NKX2-2O95096 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.83■□□□□ 0.28
NKX2-2O95096 KRT18P38-201ENST00000449496 1282 ntBASIC16.83■□□□□ 0.28
NKX2-2O95096 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.83■□□□□ 0.28
NKX2-2O95096 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.83■□□□□ 0.28
NKX2-2O95096 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NKX2-2O95096 AC113404.2-201ENST00000507884 177 ntBASIC16.83■□□□□ 0.28
NKX2-2O95096 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.83■□□□□ 0.28
NKX2-2O95096 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.83■□□□□ 0.28
NKX2-2O95096 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NKX2-2O95096 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.83■□□□□ 0.28
NKX2-2O95096 RN7SL850P-201ENST00000579959 291 ntBASIC16.83■□□□□ 0.28
NKX2-2O95096 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NKX2-2O95096 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NKX2-2O95096 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NKX2-2O95096 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NKX2-2O95096 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NKX2-2O95096 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
NKX2-2O95096 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX2-2O95096 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX2-2O95096 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX2-2O95096 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NKX2-2O95096 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NKX2-2O95096 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
NKX2-2O95096 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX2-2O95096 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX2-2O95096 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX2-2O95096 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.82■□□□□ 0.28
NKX2-2O95096 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.82■□□□□ 0.28
NKX2-2O95096 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX2-2O95096 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.82■□□□□ 0.28
NKX2-2O95096 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NKX2-2O95096 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NKX2-2O95096 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX2-2O95096 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.82■□□□□ 0.28
NKX2-2O95096 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.82■□□□□ 0.28
NKX2-2O95096 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX2-2O95096 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.82■□□□□ 0.28
NKX2-2O95096 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NKX2-2O95096 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.82■□□□□ 0.28
NKX2-2O95096 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.82■□□□□ 0.28
NKX2-2O95096 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.82■□□□□ 0.28
NKX2-2O95096 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NKX2-2O95096 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NKX2-2O95096 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.82■□□□□ 0.28
NKX2-2O95096 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.82■□□□□ 0.28
NKX2-2O95096 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX2-2O95096 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NKX2-2O95096 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.82■□□□□ 0.28
NKX2-2O95096 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX2-2O95096 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms