Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COCHO43405 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COCHO43405 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COCHO43405 AC004870.1-201ENST00000315132 882 ntBASIC18.81■□□□□ 0.6
COCHO43405 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.81■□□□□ 0.6
COCHO43405 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COCHO43405 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
COCHO43405 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.81■□□□□ 0.6
COCHO43405 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COCHO43405 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.81■□□□□ 0.6
COCHO43405 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COCHO43405 MTCL1P1-201ENST00000446207 792 ntBASIC18.81■□□□□ 0.6
COCHO43405 EMBP1-201ENST00000458200 901 ntBASIC18.81■□□□□ 0.6
COCHO43405 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.81■□□□□ 0.6
COCHO43405 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.81■□□□□ 0.6
COCHO43405 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.81■□□□□ 0.6
COCHO43405 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COCHO43405 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.81■□□□□ 0.6
COCHO43405 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COCHO43405 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
COCHO43405 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COCHO43405 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.81■□□□□ 0.6
COCHO43405 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.81■□□□□ 0.6
COCHO43405 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.81■□□□□ 0.6
COCHO43405 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COCHO43405 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COCHO43405 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COCHO43405 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.81■□□□□ 0.6
COCHO43405 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COCHO43405 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
COCHO43405 AC093503.3-201ENST00000624917 2352 ntBASIC18.81■□□□□ 0.6
COCHO43405 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COCHO43405 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
COCHO43405 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.81■□□□□ 0.6
COCHO43405 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.81■□□□□ 0.6
COCHO43405 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.81■□□□□ 0.6
COCHO43405 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.81■□□□□ 0.6
COCHO43405 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COCHO43405 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
COCHO43405 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.8■□□□□ 0.6
COCHO43405 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COCHO43405 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.8■□□□□ 0.6
COCHO43405 NUS1P2-201ENST00000417358 873 ntBASIC18.8■□□□□ 0.6
COCHO43405 KRT18P65-201ENST00000439811 1286 ntBASIC18.8■□□□□ 0.6
COCHO43405 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.8■□□□□ 0.6
COCHO43405 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.8■□□□□ 0.6
COCHO43405 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.8■□□□□ 0.6
COCHO43405 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COCHO43405 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.8■□□□□ 0.6
COCHO43405 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.8■□□□□ 0.6
COCHO43405 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.8■□□□□ 0.6
COCHO43405 AC005336.2-201ENST00000593183 939 ntBASIC18.8■□□□□ 0.6
COCHO43405 BNIP3P18-201ENST00000593976 575 ntBASIC18.8■□□□□ 0.6
COCHO43405 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.8■□□□□ 0.6
COCHO43405 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COCHO43405 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
COCHO43405 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COCHO43405 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.8■□□□□ 0.6
COCHO43405 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COCHO43405 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
COCHO43405 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COCHO43405 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COCHO43405 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COCHO43405 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.8■□□□□ 0.6
COCHO43405 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COCHO43405 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COCHO43405 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.79■□□□□ 0.6
COCHO43405 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COCHO43405 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.79■□□□□ 0.6
COCHO43405 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.79■□□□□ 0.6
COCHO43405 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.79■□□□□ 0.6
COCHO43405 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
COCHO43405 WIZP1-201ENST00000531444 2299 ntBASIC18.79■□□□□ 0.6
COCHO43405 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COCHO43405 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.79■□□□□ 0.6
COCHO43405 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.79■□□□□ 0.6
COCHO43405 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COCHO43405 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COCHO43405 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COCHO43405 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COCHO43405 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COCHO43405 LINC01711-201ENST00000598340 967 ntBASIC18.79■□□□□ 0.6
COCHO43405 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.79■□□□□ 0.6
COCHO43405 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
COCHO43405 TNXA-203ENST00000507684 2038 ntBASIC18.79■□□□□ 0.6
COCHO43405 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COCHO43405 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
COCHO43405 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COCHO43405 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COCHO43405 AC132938.6-201ENST00000623828 1655 ntBASIC18.79■□□□□ 0.6
COCHO43405 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.79■□□□□ 0.6
COCHO43405 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
COCHO43405 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
COCHO43405 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
COCHO43405 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
COCHO43405 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COCHO43405 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COCHO43405 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COCHO43405 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.78■□□□□ 0.6
COCHO43405 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms