Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.94■□□□□ 0.62
MSI1O43347 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MSI1O43347 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MSI1O43347 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MSI1O43347 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MSI1O43347 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
MSI1O43347 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
MSI1O43347 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MSI1O43347 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
MSI1O43347 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MSI1O43347 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.93■□□□□ 0.62
MSI1O43347 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.93■□□□□ 0.62
MSI1O43347 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MSI1O43347 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.93■□□□□ 0.62
MSI1O43347 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.93■□□□□ 0.62
MSI1O43347 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.93■□□□□ 0.62
MSI1O43347 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MSI1O43347 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.93■□□□□ 0.62
MSI1O43347 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.93■□□□□ 0.62
MSI1O43347 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.93■□□□□ 0.62
MSI1O43347 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.93■□□□□ 0.62
MSI1O43347 AC092119.3-201ENST00000612618 583 ntBASIC18.93■□□□□ 0.62
MSI1O43347 NPAP1P7-201ENST00000613027 823 ntBASIC18.93■□□□□ 0.62
MSI1O43347 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.93■□□□□ 0.62
MSI1O43347 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.93■□□□□ 0.62
MSI1O43347 AC026471.1-201ENST00000564629 3026 ntBASIC18.93■□□□□ 0.62
MSI1O43347 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MSI1O43347 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
MSI1O43347 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MSI1O43347 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.93■□□□□ 0.62
MSI1O43347 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MSI1O43347 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
MSI1O43347 AL353692.3-201ENST00000407031 1396 ntBASIC18.93■□□□□ 0.62
MSI1O43347 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MSI1O43347 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.93■□□□□ 0.62
MSI1O43347 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
MSI1O43347 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.92■□□□□ 0.62
MSI1O43347 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MSI1O43347 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
MSI1O43347 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
MSI1O43347 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
MSI1O43347 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MSI1O43347 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MSI1O43347 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MSI1O43347 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.92■□□□□ 0.62
MSI1O43347 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MSI1O43347 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MSI1O43347 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
MSI1O43347 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MSI1O43347 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MSI1O43347 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.92■□□□□ 0.62
MSI1O43347 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.92■□□□□ 0.62
MSI1O43347 AP002383.4-201ENST00000442518 975 ntBASIC18.92■□□□□ 0.62
MSI1O43347 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.92■□□□□ 0.62
MSI1O43347 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
MSI1O43347 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
MSI1O43347 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.92■□□□□ 0.62
MSI1O43347 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
MSI1O43347 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MSI1O43347 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MSI1O43347 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MSI1O43347 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
MSI1O43347 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MSI1O43347 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
MSI1O43347 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSI1O43347 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSI1O43347 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSI1O43347 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSI1O43347 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.91■□□□□ 0.62
MSI1O43347 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MSI1O43347 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.91■□□□□ 0.62
MSI1O43347 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSI1O43347 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
MSI1O43347 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.91■□□□□ 0.62
MSI1O43347 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.91■□□□□ 0.62
MSI1O43347 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSI1O43347 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
MSI1O43347 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSI1O43347 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
MSI1O43347 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MSI1O43347 LINC00602-201ENST00000629776 2065 ntBASIC18.91■□□□□ 0.62
MSI1O43347 AC090164.3-201ENST00000610780 2143 ntBASIC18.91■□□□□ 0.62
MSI1O43347 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
MSI1O43347 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSI1O43347 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSI1O43347 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MSI1O43347 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MSI1O43347 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MSI1O43347 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MSI1O43347 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MSI1O43347 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MSI1O43347 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.9■□□□□ 0.62
MSI1O43347 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MSI1O43347 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.9■□□□□ 0.62
MSI1O43347 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.9■□□□□ 0.62
MSI1O43347 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.9■□□□□ 0.62
MSI1O43347 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MSI1O43347 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MSI1O43347 CHCHD2P8-201ENST00000429873 447 ntBASIC18.9■□□□□ 0.62
MSI1O43347 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms