Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PHGDHO43175 AC009102.3-201ENST00000623118 1491 ntBASIC18.19■□□□□ 0.5
PHGDHO43175 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.19■□□□□ 0.5
PHGDHO43175 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PHGDHO43175 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PHGDHO43175 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PHGDHO43175 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PHGDHO43175 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PHGDHO43175 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PHGDHO43175 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
PHGDHO43175 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PHGDHO43175 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PHGDHO43175 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PHGDHO43175 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PHGDHO43175 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PHGDHO43175 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PHGDHO43175 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.18■□□□□ 0.5
PHGDHO43175 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
PHGDHO43175 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
PHGDHO43175 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PHGDHO43175 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PHGDHO43175 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PHGDHO43175 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PHGDHO43175 UNC93B2-201ENST00000285383 730 ntBASIC18.18■□□□□ 0.5
PHGDHO43175 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.18■□□□□ 0.5
PHGDHO43175 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PHGDHO43175 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.18■□□□□ 0.5
PHGDHO43175 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
PHGDHO43175 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.18■□□□□ 0.5
PHGDHO43175 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.18■□□□□ 0.5
PHGDHO43175 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.18■□□□□ 0.5
PHGDHO43175 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PHGDHO43175 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PHGDHO43175 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PHGDHO43175 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.18■□□□□ 0.5
PHGDHO43175 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PHGDHO43175 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PHGDHO43175 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.18■□□□□ 0.5
PHGDHO43175 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PHGDHO43175 GNAS-203ENST00000306120 1878 ntBASIC18.18■□□□□ 0.5
PHGDHO43175 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PHGDHO43175 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PHGDHO43175 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
PHGDHO43175 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PHGDHO43175 AC020916.1-201ENST00000587762 1774 ntBASIC18.17■□□□□ 0.5
PHGDHO43175 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PHGDHO43175 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PHGDHO43175 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.17■□□□□ 0.5
PHGDHO43175 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PHGDHO43175 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PHGDHO43175 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
PHGDHO43175 MIR149-201ENST00000384879 89 ntBASIC18.17■□□□□ 0.5
PHGDHO43175 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.17■□□□□ 0.5
PHGDHO43175 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PHGDHO43175 SLC25A1P2-201ENST00000430693 912 ntBASIC18.17■□□□□ 0.5
PHGDHO43175 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PHGDHO43175 AL353719.1-201ENST00000566847 864 ntBASIC18.17■□□□□ 0.5
PHGDHO43175 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PHGDHO43175 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PHGDHO43175 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PHGDHO43175 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PHGDHO43175 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PHGDHO43175 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PHGDHO43175 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PHGDHO43175 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PHGDHO43175 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PHGDHO43175 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PHGDHO43175 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PHGDHO43175 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.16■□□□□ 0.5
PHGDHO43175 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.16■□□□□ 0.5
PHGDHO43175 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.16■□□□□ 0.5
PHGDHO43175 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PHGDHO43175 HOXB1-202ENST00000577092 1414 ntBASIC18.16■□□□□ 0.5
PHGDHO43175 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PHGDHO43175 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PHGDHO43175 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PHGDHO43175 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.16■□□□□ 0.5
PHGDHO43175 LINC00896-202ENST00000609602 2128 ntBASIC18.16■□□□□ 0.5
PHGDHO43175 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PHGDHO43175 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PHGDHO43175 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PHGDHO43175 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PHGDHO43175 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PHGDHO43175 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PHGDHO43175 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.16■□□□□ 0.5
PHGDHO43175 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.16■□□□□ 0.5
PHGDHO43175 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.16■□□□□ 0.5
PHGDHO43175 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.16■□□□□ 0.5
PHGDHO43175 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PHGDHO43175 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PHGDHO43175 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PHGDHO43175 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.16■□□□□ 0.5
PHGDHO43175 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PHGDHO43175 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PHGDHO43175 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PHGDHO43175 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PHGDHO43175 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PHGDHO43175 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PHGDHO43175 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PHGDHO43175 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms