Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RRP8O43159 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RRP8O43159 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RRP8O43159 BX323043.1-201ENST00000641006 1765 ntBASIC17.12■□□□□ 0.33
RRP8O43159 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RRP8O43159 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RRP8O43159 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RRP8O43159 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RRP8O43159 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.12■□□□□ 0.33
RRP8O43159 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.12■□□□□ 0.33
RRP8O43159 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.12■□□□□ 0.33
RRP8O43159 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.12■□□□□ 0.33
RRP8O43159 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RRP8O43159 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RRP8O43159 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RRP8O43159 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.12■□□□□ 0.33
RRP8O43159 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RRP8O43159 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RRP8O43159 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RRP8O43159 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RRP8O43159 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RRP8O43159 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RRP8O43159 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RRP8O43159 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RRP8O43159 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RRP8O43159 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RRP8O43159 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RRP8O43159 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RRP8O43159 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RRP8O43159 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
RRP8O43159 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RRP8O43159 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.11■□□□□ 0.33
RRP8O43159 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.11■□□□□ 0.33
RRP8O43159 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.11■□□□□ 0.33
RRP8O43159 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.11■□□□□ 0.33
RRP8O43159 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.11■□□□□ 0.33
RRP8O43159 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RRP8O43159 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RRP8O43159 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RRP8O43159 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.11■□□□□ 0.33
RRP8O43159 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.11■□□□□ 0.33
RRP8O43159 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RRP8O43159 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RRP8O43159 KRT8P32-201ENST00000512863 1461 ntBASIC17.11■□□□□ 0.33
RRP8O43159 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RRP8O43159 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RRP8O43159 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RRP8O43159 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.1■□□□□ 0.33
RRP8O43159 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RRP8O43159 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RRP8O43159 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RRP8O43159 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RRP8O43159 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RRP8O43159 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.1■□□□□ 0.33
RRP8O43159 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RRP8O43159 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RRP8O43159 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RRP8O43159 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RRP8O43159 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.1■□□□□ 0.33
RRP8O43159 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RRP8O43159 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RRP8O43159 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.1■□□□□ 0.33
RRP8O43159 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.1■□□□□ 0.33
RRP8O43159 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.1■□□□□ 0.33
RRP8O43159 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RRP8O43159 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
RRP8O43159 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.1■□□□□ 0.33
RRP8O43159 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.1■□□□□ 0.33
RRP8O43159 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RRP8O43159 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RRP8O43159 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.1■□□□□ 0.33
RRP8O43159 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
RRP8O43159 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RRP8O43159 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RRP8O43159 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RRP8O43159 AP005117.1-201ENST00000584346 1413 ntBASIC17.1■□□□□ 0.33
RRP8O43159 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RRP8O43159 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RRP8O43159 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RRP8O43159 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.1■□□□□ 0.33
RRP8O43159 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RRP8O43159 Z82202.1-201ENST00000623446 1880 ntBASIC17.1■□□□□ 0.33
RRP8O43159 AL356309.3-201ENST00000624132 1934 ntBASIC17.09■□□□□ 0.33
RRP8O43159 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RRP8O43159 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RRP8O43159 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RRP8O43159 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RRP8O43159 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RRP8O43159 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RRP8O43159 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RRP8O43159 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RRP8O43159 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RRP8O43159 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.09■□□□□ 0.33
RRP8O43159 METTL21AP1-201ENST00000438852 635 ntBASIC17.09■□□□□ 0.33
RRP8O43159 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.09■□□□□ 0.33
RRP8O43159 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.09■□□□□ 0.33
RRP8O43159 SNHG9-202ENST00000564014 471 ntBASIC17.09■□□□□ 0.33
RRP8O43159 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.09■□□□□ 0.33
RRP8O43159 AC092364.2-202ENST00000597012 1073 ntBASIC17.09■□□□□ 0.33
RRP8O43159 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms