Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC24.37■■□□□ 1.49
PIK3C2AO00443 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC24.37■■□□□ 1.49
PIK3C2AO00443 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC24.37■■□□□ 1.49
PIK3C2AO00443 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC24.37■■□□□ 1.49
PIK3C2AO00443 FAM197Y3-203ENST00000618346 717 ntBASIC24.37■■□□□ 1.49
PIK3C2AO00443 ZNF259P1-201ENST00000407656 1365 ntBASIC24.37■■□□□ 1.49
PIK3C2AO00443 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PIK3C2AO00443 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC24.37■■□□□ 1.49
PIK3C2AO00443 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PIK3C2AO00443 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PIK3C2AO00443 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PIK3C2AO00443 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC24.37■■□□□ 1.49
PIK3C2AO00443 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC24.37■■□□□ 1.49
PIK3C2AO00443 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC24.37■■□□□ 1.49
PIK3C2AO00443 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC24.37■■□□□ 1.49
PIK3C2AO00443 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC24.37■■□□□ 1.49
PIK3C2AO00443 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
PIK3C2AO00443 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PIK3C2AO00443 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PIK3C2AO00443 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC24.36■■□□□ 1.49
PIK3C2AO00443 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
PIK3C2AO00443 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PIK3C2AO00443 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC24.36■■□□□ 1.49
PIK3C2AO00443 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
PIK3C2AO00443 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PIK3C2AO00443 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PIK3C2AO00443 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC24.36■■□□□ 1.49
PIK3C2AO00443 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC24.36■■□□□ 1.49
PIK3C2AO00443 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PIK3C2AO00443 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC24.36■■□□□ 1.49
PIK3C2AO00443 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC24.36■■□□□ 1.49
PIK3C2AO00443 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PIK3C2AO00443 KIRREL3-AS3-201ENST00000404882 831 ntBASIC24.36■■□□□ 1.49
PIK3C2AO00443 KRT18P27-201ENST00000427733 1299 ntBASIC24.36■■□□□ 1.49
PIK3C2AO00443 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC24.36■■□□□ 1.49
PIK3C2AO00443 AL356488.2-201ENST00000602755 427 ntBASIC24.36■■□□□ 1.49
PIK3C2AO00443 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
PIK3C2AO00443 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC24.36■■□□□ 1.49
PIK3C2AO00443 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC24.36■■□□□ 1.49
PIK3C2AO00443 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
PIK3C2AO00443 HLA-J-201ENST00000462773 1622 ntBASIC24.36■■□□□ 1.49
PIK3C2AO00443 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
PIK3C2AO00443 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PIK3C2AO00443 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PIK3C2AO00443 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PIK3C2AO00443 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PIK3C2AO00443 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PIK3C2AO00443 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PIK3C2AO00443 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC24.35■■□□□ 1.49
PIK3C2AO00443 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
PIK3C2AO00443 ESPNP-201ENST00000270691 2015 ntBASIC24.35■■□□□ 1.49
PIK3C2AO00443 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PIK3C2AO00443 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
PIK3C2AO00443 AC093010.1-201ENST00000473625 1624 ntBASIC24.34■■□□□ 1.49
PIK3C2AO00443 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PIK3C2AO00443 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PIK3C2AO00443 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PIK3C2AO00443 CENPM-204ENST00000402420 688 ntTSL 5 BASIC24.34■■□□□ 1.49
PIK3C2AO00443 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
PIK3C2AO00443 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC24.34■■□□□ 1.49
PIK3C2AO00443 COX5A-204ENST00000567270 579 ntTSL 3 BASIC24.34■■□□□ 1.49
PIK3C2AO00443 NKAPP1-205ENST00000585790 367 ntBASIC24.34■■□□□ 1.49
PIK3C2AO00443 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PIK3C2AO00443 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
PIK3C2AO00443 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
PIK3C2AO00443 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC24.34■■□□□ 1.49
PIK3C2AO00443 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PIK3C2AO00443 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PIK3C2AO00443 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PIK3C2AO00443 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PIK3C2AO00443 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PIK3C2AO00443 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC24.34■■□□□ 1.49
PIK3C2AO00443 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
PIK3C2AO00443 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC24.34■■□□□ 1.49
PIK3C2AO00443 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
PIK3C2AO00443 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC24.34■■□□□ 1.49
PIK3C2AO00443 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC24.34■■□□□ 1.49
PIK3C2AO00443 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
PIK3C2AO00443 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PIK3C2AO00443 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC24.33■■□□□ 1.49
PIK3C2AO00443 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC24.33■■□□□ 1.49
PIK3C2AO00443 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PIK3C2AO00443 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC24.33■■□□□ 1.49
PIK3C2AO00443 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC24.33■■□□□ 1.49
PIK3C2AO00443 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC24.33■■□□□ 1.49
PIK3C2AO00443 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC24.33■■□□□ 1.49
PIK3C2AO00443 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
PIK3C2AO00443 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC24.33■■□□□ 1.49
PIK3C2AO00443 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC24.33■■□□□ 1.49
PIK3C2AO00443 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PIK3C2AO00443 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PIK3C2AO00443 AC007967.2-201ENST00000432613 625 ntBASIC24.33■■□□□ 1.49
PIK3C2AO00443 AL591424.1-201ENST00000442569 1213 ntBASIC24.33■■□□□ 1.49
PIK3C2AO00443 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
PIK3C2AO00443 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC24.33■■□□□ 1.49
PIK3C2AO00443 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC24.33■■□□□ 1.49
PIK3C2AO00443 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC24.33■■□□□ 1.49
PIK3C2AO00443 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PIK3C2AO00443 AC073592.4-201ENST00000623827 446 ntBASIC24.33■■□□□ 1.49
PIK3C2AO00443 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms