Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TAF4O00268 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.87■□□□□ 0.45
TAF4O00268 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.87■□□□□ 0.45
TAF4O00268 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.87■□□□□ 0.45
TAF4O00268 TERC-201ENST00000602385 541 ntBASIC17.87■□□□□ 0.45
TAF4O00268 AC140113.2-201ENST00000604370 208 ntBASIC17.87■□□□□ 0.45
TAF4O00268 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TAF4O00268 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
TAF4O00268 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TAF4O00268 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.87■□□□□ 0.45
TAF4O00268 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.87■□□□□ 0.45
TAF4O00268 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.87■□□□□ 0.45
TAF4O00268 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TAF4O00268 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TAF4O00268 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TAF4O00268 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TAF4O00268 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TAF4O00268 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.87■□□□□ 0.45
TAF4O00268 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TAF4O00268 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
TAF4O00268 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TAF4O00268 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TAF4O00268 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TAF4O00268 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TAF4O00268 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TAF4O00268 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
TAF4O00268 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TAF4O00268 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TAF4O00268 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TAF4O00268 MIR940-201ENST00000401276 94 ntBASIC17.86■□□□□ 0.45
TAF4O00268 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
TAF4O00268 AC074051.2-201ENST00000565115 352 ntBASIC17.86■□□□□ 0.45
TAF4O00268 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.86■□□□□ 0.45
TAF4O00268 AL773604.1-201ENST00000617417 272 ntBASIC17.86■□□□□ 0.45
TAF4O00268 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.86■□□□□ 0.45
TAF4O00268 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.86■□□□□ 0.45
TAF4O00268 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.86■□□□□ 0.45
TAF4O00268 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TAF4O00268 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TAF4O00268 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TAF4O00268 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TAF4O00268 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
TAF4O00268 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TAF4O00268 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TAF4O00268 AC106820.2-201ENST00000563775 3264 ntBASIC17.85■□□□□ 0.45
TAF4O00268 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.85■□□□□ 0.45
TAF4O00268 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TAF4O00268 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TAF4O00268 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TAF4O00268 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TAF4O00268 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TAF4O00268 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TAF4O00268 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
TAF4O00268 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TAF4O00268 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TAF4O00268 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TAF4O00268 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.85■□□□□ 0.45
TAF4O00268 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TAF4O00268 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TAF4O00268 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TAF4O00268 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.85■□□□□ 0.45
TAF4O00268 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.85■□□□□ 0.45
TAF4O00268 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TAF4O00268 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
TAF4O00268 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TAF4O00268 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TAF4O00268 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.85■□□□□ 0.45
TAF4O00268 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TAF4O00268 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.85■□□□□ 0.45
TAF4O00268 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.85■□□□□ 0.45
TAF4O00268 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TAF4O00268 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.85■□□□□ 0.45
TAF4O00268 AL032819.2-201ENST00000624543 2162 ntBASIC17.85■□□□□ 0.45
TAF4O00268 TREX1-205ENST00000625293 1783 ntBASIC17.85■□□□□ 0.45
TAF4O00268 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TAF4O00268 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.85■□□□□ 0.45
TAF4O00268 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.85■□□□□ 0.45
TAF4O00268 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TAF4O00268 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TAF4O00268 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.85■□□□□ 0.45
TAF4O00268 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TAF4O00268 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.84■□□□□ 0.45
TAF4O00268 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TAF4O00268 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TAF4O00268 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TAF4O00268 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TAF4O00268 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TAF4O00268 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
TAF4O00268 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TAF4O00268 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TAF4O00268 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TAF4O00268 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TAF4O00268 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TAF4O00268 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.84■□□□□ 0.45
TAF4O00268 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.84■□□□□ 0.45
TAF4O00268 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TAF4O00268 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TAF4O00268 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TAF4O00268 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TAF4O00268 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms