Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TLR4O00206 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
TLR4O00206 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TLR4O00206 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TLR4O00206 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TLR4O00206 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.08■□□□□ 0.48
TLR4O00206 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.07■□□□□ 0.48
TLR4O00206 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TLR4O00206 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
TLR4O00206 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
TLR4O00206 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
TLR4O00206 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.07■□□□□ 0.48
TLR4O00206 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TLR4O00206 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.07■□□□□ 0.48
TLR4O00206 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
TLR4O00206 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.07■□□□□ 0.48
TLR4O00206 AP000347.1-202ENST00000435868 847 ntBASIC18.07■□□□□ 0.48
TLR4O00206 MINOS1P3-201ENST00000457048 203 ntBASIC18.07■□□□□ 0.48
TLR4O00206 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TLR4O00206 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TLR4O00206 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.07■□□□□ 0.48
TLR4O00206 AP005901.3-202ENST00000581653 237 ntBASIC18.07■□□□□ 0.48
TLR4O00206 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.07■□□□□ 0.48
TLR4O00206 AL121912.1-201ENST00000603683 238 ntBASIC18.07■□□□□ 0.48
TLR4O00206 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TLR4O00206 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TLR4O00206 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TLR4O00206 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TLR4O00206 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TLR4O00206 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TLR4O00206 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.07■□□□□ 0.48
TLR4O00206 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TLR4O00206 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TLR4O00206 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.07■□□□□ 0.48
TLR4O00206 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TLR4O00206 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.06■□□□□ 0.48
TLR4O00206 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
TLR4O00206 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TLR4O00206 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TLR4O00206 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TLR4O00206 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TLR4O00206 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TLR4O00206 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TLR4O00206 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.06■□□□□ 0.48
TLR4O00206 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TLR4O00206 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TLR4O00206 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.06■□□□□ 0.48
TLR4O00206 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.06■□□□□ 0.48
TLR4O00206 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TLR4O00206 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TLR4O00206 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TLR4O00206 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.06■□□□□ 0.48
TLR4O00206 AP002469.2-201ENST00000531724 424 ntBASIC18.06■□□□□ 0.48
TLR4O00206 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.06■□□□□ 0.48
TLR4O00206 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.06■□□□□ 0.48
TLR4O00206 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.06■□□□□ 0.48
TLR4O00206 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TLR4O00206 AC004263.2-201ENST00000617183 678 ntBASIC18.06■□□□□ 0.48
TLR4O00206 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.06■□□□□ 0.48
TLR4O00206 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TLR4O00206 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TLR4O00206 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TLR4O00206 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TLR4O00206 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TLR4O00206 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TLR4O00206 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TLR4O00206 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TLR4O00206 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TLR4O00206 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TLR4O00206 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.06■□□□□ 0.48
TLR4O00206 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TLR4O00206 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.06■□□□□ 0.48
TLR4O00206 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
TLR4O00206 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TLR4O00206 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
TLR4O00206 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TLR4O00206 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.05■□□□□ 0.48
TLR4O00206 AC091607.1-201ENST00000490318 1060 ntBASIC18.05■□□□□ 0.48
TLR4O00206 AL662844.1-201ENST00000546340 181 ntBASIC18.05■□□□□ 0.48
TLR4O00206 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TLR4O00206 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
TLR4O00206 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TLR4O00206 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TLR4O00206 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TLR4O00206 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.05■□□□□ 0.48
TLR4O00206 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TLR4O00206 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
TLR4O00206 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TLR4O00206 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TLR4O00206 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TLR4O00206 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.05■□□□□ 0.48
TLR4O00206 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.05■□□□□ 0.48
TLR4O00206 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TLR4O00206 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TLR4O00206 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TLR4O00206 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TLR4O00206 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.04■□□□□ 0.48
TLR4O00206 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.04■□□□□ 0.48
TLR4O00206 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TLR4O00206 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms